DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VRTST
Uniprot ID:
Q9UK17
Source protein:
Potassium voltage-gated channel subfamily D member 3
Source gene:
KCND3
Class:
DEG_SPOP_SBC_1
Location:
500:504
E3 ligase:
SPOP
DEGRON score:
0.8401
ASA_SCORE:
89.38
COIL:
0.7902
CONS_SCORE:
0.3405
DSS_SCORE:
0.2358
HELIX:
0.1324
FCONS_SCORE:
1.0206
RIG_SCORE:
0.7941
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q499K
DO229009
LICA
ICGC
VRTST
DEG_SPOP_SBC_1
0.75
p.E503G
DO229208
THCA
ICGC
VRTST
DEG_SPOP_SBC_1
0.7199
p.T502A
DO222798
COCA
ICGC
VRTST
DEG_SPOP_SBC_1
0.7139
p.T502I
DO231712
LINC
ICGC
VRTST
DEG_SPOP_SBC_1
0.7078
p.E503K
DO222843
MELA
ICGC
VRTST
DEG_SPOP_SBC_1
0.7022
p.N500K
DO229006
LICA
ICGC
VRTST
DEG_SPOP_SBC_1
0.6918
p.R501Q
TCGA-DA-A1IC
SKCM
TCGA
VRTST
DEG_SPOP_SBC_1
0.6218
p.R501Q
DO233764
GACA
ICGC
VRTST
DEG_SPOP_SBC_1
0.6218
p.R501Q
DO37430
SKCM
ICGC
VRTST
DEG_SPOP_SBC_1
0.6218
p.I505M
TCGA-C8-A26X
BRCA
TCGA
VRTST
DEG_SPOP_SBC_1
0.3056
p.I505M
TCGA-DK-AA71
BLCA
TCGA
VRTST
DEG_SPOP_SBC_1
0.3056
p.I505M
DO219010
BLCA
ICGC
VRTST
DEG_SPOP_SBC_1
0.3056
p.I505M
DO5549
BRCA
ICGC
VRTST
DEG_SPOP_SBC_1
0.3056
p.E498Q
DO23742
LUAD
ICGC
VRTST
DEG_SPOP_SBC_1
0.2778
p.M506I
ACH-000495
Kidney Cancer
CCLE
VRTST
DEG_SPOP_SBC_1
0.2778
p.P496H
TCGA-HU-A4GU
STAD
TCGA
VRTST
DEG_SPOP_SBC_1
0.2222
p.P496H
DO47849
STAD
ICGC
VRTST
DEG_SPOP_SBC_1
0.2222
p.E509K
TCGA-19-5956
GBM
TCGA
VRTST
DEG_SPOP_SBC_1
0.1944
p.E509K
TCGA-AG-A002
READ
TCGA
VRTST
DEG_SPOP_SBC_1
0.1944
p.Q495K
DO229028
LICA
ICGC
VRTST
DEG_SPOP_SBC_1
0.1944
p.D494G
SIDM00217
Colorectal Carcinoma
GDSC
VRTST
DEG_SPOP_SBC_1
0.1667
p.D494G
ACH-000999
Colon/Colorectal Cancer
CCLE
VRTST
DEG_SPOP_SBC_1
0.1667
p.D494G
SNU-1040
large_intestine
COSMIC
VRTST
DEG_SPOP_SBC_1
0.1667
p.L492I
TCGA-B5-A1MR
UCEC
TCGA
VRTST
DEG_SPOP_SBC_1
0.1111
p.L492I
DO41758
UCEC
ICGC
VRTST
DEG_SPOP_SBC_1
0.1111
Showing 1 to 25 of 27 entries
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Drug responses associated with KCND3 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of VRTST
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q2TAC2
Coiled-coil domain-containing protein 57
DEG_SPOP_SBC_1
620:624
VRTST
SPOP
0.5097
More...
Q96D42
Hepatitis A virus cellular receptor 1
DEG_SPOP_SBC_1
144:148
VRTST
SPOP
0.9891
More...
Q9UK17
Potassium voltage-gated channel subfamily D member 3
DEG_SPOP_SBC_1
500:504
VRTST
SPOP
0.8401
More...
Showing 1 to 3 of 3 entries
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