DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRTST
Uniprot ID:
Q96D42
Source protein:
Hepatitis A virus cellular receptor 1
Source gene:
HAVCR1
Class:
DEG_SPOP_SBC_1
Location:
144:148
E3 ligase:
SPOP
DEGRON score:
0.9891
ASA_SCORE:
111.96
COIL:
0.9654
CONS_SCORE:
0.2257
DSS_SCORE:
0.4191
HELIX:
0.0096
FCONS_SCORE:
0.9642
RIG_SCORE:
0.8041
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T148N
TCGA-17-Z059
LUAD
TCGA
VRTST
DEG_SPOP_SBC_1
0.7055
p.V141I
TCGA-A5-A0G2
UCEC
TCGA
VRTST
DEG_SPOP_SBC_1
0.25
p.V141I
TCGA-AZ-6598
COAD
TCGA
VRTST
DEG_SPOP_SBC_1
0.25
p.V141I
TCGA-D1-A0ZO
UCEC
TCGA
VRTST
DEG_SPOP_SBC_1
0.25
p.V141I
DO10276
COAD
ICGC
VRTST
DEG_SPOP_SBC_1
0.25
p.V141I
DO233205
GACA
ICGC
VRTST
DEG_SPOP_SBC_1
0.25
p.V141I
DO41927
UCEC
ICGC
VRTST
DEG_SPOP_SBC_1
0.25
p.V141I
DO41235
UCEC
ICGC
VRTST
DEG_SPOP_SBC_1
0.25
p.R145Q
TCGA-AG-A002
READ
TCGA
VRTST
DEG_SPOP_SBC_1
0.6218
p.R145Q
TCGA-EE-A2GD
SKCM
TCGA
VRTST
DEG_SPOP_SBC_1
0.6218
p.R145Q
DO229459
SKCA
ICGC
VRTST
DEG_SPOP_SBC_1
0.6218
p.R145Q
DO37603
SKCM
ICGC
VRTST
DEG_SPOP_SBC_1
0.6218
p.T140I
TCGA-B0-4698
KIRC
TCGA
VRTST
DEG_SPOP_SBC_1
0.2222
p.T140I
DO20368
KIRC
ICGC
VRTST
DEG_SPOP_SBC_1
0.2222
p.S147R
TCGA-BR-8363
STAD
TCGA
VRTST
DEG_SPOP_SBC_1
0.7427
p.S147R
DO47837
STAD
ICGC
VRTST
DEG_SPOP_SBC_1
0.7427
p.T146R
TCGA-CV-6938
HNSC
TCGA
VRTST
DEG_SPOP_SBC_1
0.7876
p.T146R
DO14462
HNSC
ICGC
VRTST
DEG_SPOP_SBC_1
0.7876
p.R145L
TCGA-L9-A8F4
LUAD
TCGA
VRTST
DEG_SPOP_SBC_1
0.7316
p.R145L
DO49876
LUAD
ICGC
VRTST
DEG_SPOP_SBC_1
0.7316
p.M158T
DO224820
COCA
ICGC
VRTST
DEG_SPOP_SBC_1
0.0556
p.M158T
DO52361
LUSC
ICGC
VRTST
DEG_SPOP_SBC_1
0.0556
p.T146K
DO229041
LICA
ICGC
VRTST
DEG_SPOP_SBC_1
0.7306
p.S147C
DO50972
LICA
ICGC
VRTST
DEG_SPOP_SBC_1
0.7541
p.T148S
DO51491
PACA
ICGC
VRTST
DEG_SPOP_SBC_1
0.6005
p.M158I
DO229272
THCA
ICGC
VRTST
DEG_SPOP_SBC_1
0.0556
p.M158I
DO229245
THCA
ICGC
VRTST
DEG_SPOP_SBC_1
0.0556
p.T155N
SIDM00700
Non-Small Cell Lung Carcinoma
GDSC
VRTST
DEG_SPOP_SBC_1
0.1389
p.T155N
ACH-001363
Lung Cancer
CCLE
VRTST
DEG_SPOP_SBC_1
0.1389
p.T155N
NCI-H2135
lung
COSMIC
VRTST
DEG_SPOP_SBC_1
0.1389
p.T142M
SIDM00837
Colorectal Carcinoma
GDSC
VRTST
DEG_SPOP_SBC_1
0.2778
p.T142M
ACH-000958
Colon/Colorectal Cancer
CCLE
VRTST
DEG_SPOP_SBC_1
0.2778
p.T142M
SW48
large_intestine
COSMIC
VRTST
DEG_SPOP_SBC_1
0.2778
p.T155P
ACH-001433
Sarcoma
CCLE
VRTST
DEG_SPOP_SBC_1
0.1389
Drug responses associated with HAVCR1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q2TAC2
Coiled-coil domain-containing protein 57
DEG_SPOP_SBC_1
620:624
VRTST
SPOP
0.5097
More...
Q96D42
Hepatitis A virus cellular receptor 1
DEG_SPOP_SBC_1
144:148
VRTST
SPOP
0.9891
More...
Q9UK17
Potassium voltage-gated channel subfamily D member 3
DEG_SPOP_SBC_1
500:504
VRTST
SPOP
0.8401
More...