DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPGLS
Uniprot ID:
Q2VIQ3
Source protein:
Chromosome-associated kinesin KIF4B
Source gene:
KIF4B
Class:
DEG_SCF_FBW7_1
Location:
1150:1155
E3 ligase:
FBXW7
DEGRON score:
0.9954
ASA_SCORE:
66.0833
COIL:
0.741
CONS_SCORE:
0.3291
DSS_SCORE:
0.3929
HELIX:
0.0512
FCONS_SCORE:
1.0153
RIG_SCORE:
0.7457
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G1153V
TCGA-AA-A010
COAD
TCGA
VTPGLS
DEG_SCF_FBW7_1
0.6421
p.P1159S
TCGA-AA-A01P
COAD
TCGA
VTPGLS
DEG_SCF_FBW7_1
0.2222
p.P1159S
DO8642
COAD
ICGC
VTPGLS
DEG_SCF_FBW7_1
0.2222
p.A1162S
TCGA-B5-A1MU
UCEC
TCGA
VTPGLS
DEG_SCF_FBW7_1
0.1389
p.A1162S
DO41512
UCEC
ICGC
VTPGLS
DEG_SCF_FBW7_1
0.1389
p.G1140S
TCGA-DA-A95W
SKCM
TCGA
VTPGLS
DEG_SCF_FBW7_1
0.0556
p.G1140S
DO219479
SKCM
ICGC
VTPGLS
DEG_SCF_FBW7_1
0.0556
p.P1147S
TCGA-EB-A44O
SKCM
TCGA
VTPGLS
DEG_SCF_FBW7_1
0.25
p.P1147S
TCGA-FW-A3R5
SKCM
TCGA
VTPGLS
DEG_SCF_FBW7_1
0.25
p.P1147S
DO47272
SKCM
ICGC
VTPGLS
DEG_SCF_FBW7_1
0.25
p.P1147S
DO37406
SKCM
ICGC
VTPGLS
DEG_SCF_FBW7_1
0.25
p.L1154F
TCGA-EE-A29X
SKCM
TCGA
VTPGLS
DEG_SCF_FBW7_1
0.587
p.L1154F
DO37595
SKCM
ICGC
VTPGLS
DEG_SCF_FBW7_1
0.587
p.G1153E
TCGA-ER-A3PL
SKCM
TCGA
VTPGLS
DEG_SCF_FBW7_1
0.6087
p.G1153E
DO8264
COAD
ICGC
VTPGLS
DEG_SCF_FBW7_1
0.6087
p.G1153E
DO37495
SKCM
ICGC
VTPGLS
DEG_SCF_FBW7_1
0.6087
p.S1141F
TCGA-GN-A4U4
SKCM
TCGA
VTPGLS
DEG_SCF_FBW7_1
0.5278
p.S1141F
DO51256
SKCM
ICGC
VTPGLS
DEG_SCF_FBW7_1
0.5278
p.F1156S
SIDM00157
Neuroblastoma
GDSC
VTPGLS
DEG_SCF_FBW7_1
0.3056
p.F1156S
ACH-002261
Neuroblastoma
CCLE
VTPGLS
DEG_SCF_FBW7_1
0.3056
p.F1156S
KP-N-YS
autonomic_ganglia
COSMIC
VTPGLS
DEG_SCF_FBW7_1
0.3056
p.P1152Q
SIDM01739
Small Cell Lung Carcinoma
GDSC
VTPGLS
DEG_SCF_FBW7_1
0.7035
p.P1152Q
ACH-000297
Lung Cancer
CCLE
VTPGLS
DEG_SCF_FBW7_1
0.7035
Drug responses associated with KIF4B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPGLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95239
Chromosome-associated kinesin KIF4A
DEG_SCF_FBW7_1
1148:1153
VTPGLS
FBXW7
0.999
More...
Q2VIQ3
Chromosome-associated kinesin KIF4B
DEG_SCF_FBW7_1
1150:1155
VTPGLS
FBXW7
0.9954
More...
Q9NQH7
Xaa-Pro aminopeptidase 3
DEG_SCF_FBW7_1
63:68
VTPGLS
FBXW7
0.9621
More...