DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPSSS
Uniprot ID:
Q53TQ3
Source protein:
INO80 complex subunit D
Source gene:
INO80D
Class:
DEG_SCF_FBW7_1
Location:
937:942
E3 ligase:
FBXW7
DEGRON score:
0.9957
ASA_SCORE:
70.9833
COIL:
0.913
CONS_SCORE:
0
DSS_SCORE:
0.569
HELIX:
0.0487
FCONS_SCORE:
0
RIG_SCORE:
0.676
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L945F
TCGA-B5-A1MX
UCEC
TCGA
VTPSSS
DEG_SCF_FBW7_1
0.25
p.L945F
DO41999
UCEC
ICGC
VTPSSS
DEG_SCF_FBW7_1
0.25
p.T930I
TCGA-B5-A1MX
UCEC
TCGA
VTPSSS
DEG_SCF_FBW7_1
0.1389
p.T930I
DO41999
UCEC
ICGC
VTPSSS
DEG_SCF_FBW7_1
0.1389
p.P946L
TCGA-FI-A2D6
UCEC
TCGA
VTPSSS
DEG_SCF_FBW7_1
0.2222
p.P946L
DO233869
GACA
ICGC
VTPSSS
DEG_SCF_FBW7_1
0.2222
p.P946L
DO43867
UCEC
ICGC
VTPSSS
DEG_SCF_FBW7_1
0.2222
p.P946L
ACH-000999
Colon/Colorectal Cancer
CCLE
VTPSSS
DEG_SCF_FBW7_1
0.2222
p.G947V
DO231047
LUSC
ICGC
VTPSSS
DEG_SCF_FBW7_1
0.1944
p.P932T
DO232761
PBCA
ICGC
VTPSSS
DEG_SCF_FBW7_1
0.1944
p.A935T
SIDM01016
T-Lymphoblastic Leukemia
GDSC
VTPSSS
DEG_SCF_FBW7_1
0.2778
p.A935T
SIDM01263
T-Lymphoblastic Leukemia
GDSC
VTPSSS
DEG_SCF_FBW7_1
0.2778
p.T936I
SIDM00007
Other Solid Cancers
GDSC
VTPSSS
DEG_SCF_FBW7_1
0.3056
p.T936I
ACH-001550
Skin Cancer
CCLE
VTPSSS
DEG_SCF_FBW7_1
0.3056
p.T936I
MCC13
skin
COSMIC
VTPSSS
DEG_SCF_FBW7_1
0.3056
p.E928V
SIDM01071
Small Cell Lung Carcinoma
GDSC
VTPSSS
DEG_SCF_FBW7_1
0.0833
p.E928V
ACH-000515
Lung Cancer
CCLE
VTPSSS
DEG_SCF_FBW7_1
0.0833
p.E928V
HCC-33
lung
COSMIC
VTPSSS
DEG_SCF_FBW7_1
0.0833
Drug responses associated with INO80D mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q53TQ3
INO80 complex subunit D
DEG_SCF_FBW7_1
937:942
VTPSSS
FBXW7
0.9957
More...
Q8IX15
Homeobox and leucine zipper protein Homez
DEG_SCF_FBW7_1
281:286
VTPSSS
FBXW7
0.9457
More...
Q9HC84
Mucin-5B
DEG_SCF_FBW7_1
3875:3880
VTPSSS
FBXW7
0.9893
More...