DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPSST
Uniprot ID:
Q8IZT6
Source protein:
Abnormal spindle-like microcephaly-associated protein
Source gene:
ASPM
Class:
DEG_SCF_FBW7_1
Location:
562:567
E3 ligase:
FBXW7
DEGRON score:
0.9982
ASA_SCORE:
78.2333
COIL:
0.8957
CONS_SCORE:
0.3124
DSS_SCORE:
0.5049
HELIX:
0.049
FCONS_SCORE:
1.0805
RIG_SCORE:
0.674
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K556N
TCGA-AG-A002
READ
TCGA
VTPSST
DEG_SCF_FBW7_1
0.2778
p.V571L
TCGA-BB-A5HY
HNSC
TCGA
VTPSST
DEG_SCF_FBW7_1
0.2222
p.V571L
DO218979
HNSC
ICGC
VTPSST
DEG_SCF_FBW7_1
0.2222
p.S557C
TCGA-BR-8080
STAD
TCGA
VTPSST
DEG_SCF_FBW7_1
0.1944
p.S557C
DO38651
STAD
ICGC
VTPSST
DEG_SCF_FBW7_1
0.1944
p.K556E
TCGA-CV-5435
HNSC
TCGA
VTPSST
DEG_SCF_FBW7_1
0.2778
p.K556E
DO14299
HNSC
ICGC
VTPSST
DEG_SCF_FBW7_1
0.2778
p.S565T
TCGA-CV-5973
HNSC
TCGA
VTPSST
DEG_SCF_FBW7_1
0.7116
p.S565T
DO15014
HNSC
ICGC
VTPSST
DEG_SCF_FBW7_1
0.7116
p.A572D
DO229018
LICA
ICGC
VTPSST
DEG_SCF_FBW7_1
0.1944
p.T563K
DO229038
LICA
ICGC
VTPSST
DEG_SCF_FBW7_1
0.8417
p.S566L
SIDM02021
Esophageal Carcinoma
GDSC
VTPSST
DEG_SCF_FBW7_1
0.6556
p.S566L
SIDM00215
Colorectal Carcinoma
GDSC
VTPSST
DEG_SCF_FBW7_1
0.6556
p.S566L
ACH-000460
Ovarian Cancer
CCLE
VTPSST
DEG_SCF_FBW7_1
0.6556
p.S566L
ACH-000708
Colon/Colorectal Cancer
CCLE
VTPSST
DEG_SCF_FBW7_1
0.6556
p.S566L
SNU-283
large_intestine
COSMIC
VTPSST
DEG_SCF_FBW7_1
0.6556
p.R573W
SIDM01006
Plasma Cell Myeloma
GDSC
VTPSST
DEG_SCF_FBW7_1
0.1667
p.R573W
SIDM00741
Small Cell Lung Carcinoma
GDSC
VTPSST
DEG_SCF_FBW7_1
0.1667
p.R573W
SIDM00522
Small Cell Lung Carcinoma
GDSC
VTPSST
DEG_SCF_FBW7_1
0.1667
p.R573W
SIDM00888
Other Solid Cancers
GDSC
VTPSST
DEG_SCF_FBW7_1
0.1667
p.R573W
SIDM00833
Colorectal Carcinoma
GDSC
VTPSST
DEG_SCF_FBW7_1
0.1667
p.S570L
SIDM00747
Non-Small Cell Lung Carcinoma
GDSC
VTPSST
DEG_SCF_FBW7_1
0.6944
p.S570L
ACH-000744
Lung Cancer
CCLE
VTPSST
DEG_SCF_FBW7_1
0.6944
p.S570L
NCI-H1623
lung
COSMIC
VTPSST
DEG_SCF_FBW7_1
0.6944
p.R573Q
ACH-001523
Skin Cancer
CCLE
VTPSST
DEG_SCF_FBW7_1
0.1667
Drug responses associated with ASPM mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75179
Ankyrin repeat domain-containing protein 17
DEG_SCF_FBW7_1
2332:2337
VTPSST
FBXW7
0.9362
More...
Q16186
Proteasomal ubiquitin receptor ADRM1
DEG_SCF_FBW7_1
216:221
VTPSST
FBXW7
0.9893
More...
Q8IZT6
Abnormal spindle-like microcephaly-associated protein
DEG_SCF_FBW7_1
562:567
VTPSST
FBXW7
0.9982
More...