DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VYSST
Uniprot ID:
Q9NR34
Source protein:
Mannosyl-oligosaccharide 1,2-alpha-mannosidase IC
Source gene:
MAN1C1
Class:
DEG_SPOP_SBC_1
Location:
568:572
E3 ligase:
SPOP
DEGRON score:
0.5468
ASA_SCORE:
70.18
COIL:
0.9478
CONS_SCORE:
0.3782
DSS_SCORE:
0.3701
HELIX:
0.0144
FCONS_SCORE:
0.7518
RIG_SCORE:
0.7411
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A560T
TCGA-AP-A056
UCEC
TCGA
VYSST
DEG_SPOP_SBC_1
0.1111
p.Q580H
TCGA-AX-A2HD
UCEC
TCGA
VYSST
DEG_SPOP_SBC_1
0.1111
p.V568M
TCGA-B5-A0K9
UCEC
TCGA
VYSST
DEG_SPOP_SBC_1
0.7208
p.T558A
TCGA-DU-6392
LGG
TCGA
VYSST
DEG_SPOP_SBC_1
0.0556
p.P573A
TCGA-SX-A7SM
KIRP
TCGA
VYSST
DEG_SPOP_SBC_1
0.3056
Drug responses associated with MAN1C1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VYSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75113
NEDD4-binding protein 1
DEG_SPOP_SBC_1
414:418
VYSST
SPOP
0.9819
More...
P13611
Versican core protein
DEG_SPOP_SBC_1
1740:1744
VYSST
SPOP
0.8735
More...
Q9NR34
Mannosyl-oligosaccharide 1,2-alpha-mannosidase IC
DEG_SPOP_SBC_1
568:572
VYSST
SPOP
0.5468
More...