| Tag | Content |
|---|---|
| Uniprot ID | A0A096MK92 |
| Entrez ID | 305918 |
| Genbank protein ID | |
| Genbank nucleotide ID | XM_017599687.1; XM_006252066.3; XM_006252067.3; XM_006252068.3; |
| Ensembl protein ID | ENSRNOP00000068425 |
| Ensembl nucleotide ID | ENSRNOG00000009278 |
| Gene name | Intraflagellar transport 88 |
| Gene symbol | Ift88 |
| Organism | Rattus norvegicus |
| NCBI taxa ID | 10116 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | MMENVHLAPE TDEDDLYSGF NDYNPAYDTE ELENDTGFQQ AVRTSHGRRP PVTAKIPSTA 60 VSRPIATGYG SKTSLTSSMG RPMTGTIQDG VARPMTAVRA AGFSKAALRG SAFDPLGQSR 120 GPAPPLEAKN EDSPEEKIRQ LEKKVNELVE ESCIANSCGD LKLALEKAKD AGRKERVLVR 180 QREQVTSPEN INLDLTYSVL FNLASQYSAN EMYAEALNTY QVIVKNKMFS NAGRLKVNMG 240 NIYLKQRNYS KAIKFYRMAL DQIPSVHKEM RIKIMQNIGI TFIKTGQYSD AINSFEHIMS 300 MAPSLKAGFN LILSCFAIGD REKMKKAFQK LIAVPLEIDE DDKYISPSDD PHTNLLIEAI 360 KNDHLRQMER ERKAMAEKYI MTAAKLIAPV IEASFAVGYN WCVEVVKASQ YVELANDLEI 420 NKAITYLRQK DFNQAVDTLK MFEKKDSRVK SAAATNLSFL YYLENEFAQA SSYADLAVSS 480 DRYNPSALTN KGNTVFANGD YEKAAEFYKE ALRNDSSCTE ALYNIGLTYK KLNRLDEALD 540 SFLKLHAILR NSAQVLCQIA NVYELMEDPN QAIEWLMQLI SVVPTDSQAL SKLGELYDSE 600 GDKSQAFQYY YESYRYFPSN IEVIEWLGAY YIDTQFCEKA IQYFERASLI QPTQVKWQLM 660 VASCFRRSGN YQKALDTYKE IHRKFPENVE CLRFLVRLCT DIGLKEVQEY ATKLKRLEKM 720 KEMREQRIKS GRDSGGGSRS KREGSAGSDS GQNSSASSKS ERLSAKLRAL PGTDEPYESS 780 GNKEIDASYV DPLGPQIERP KTAARKRIDE DDFADEELGD DLLPE 825 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | IFT88 | 514177 | E1BLX1 | Bos taurus | Prediction | More>> | ||
| 1:1 ortholog | IFT88 | 477345 | E2R838 | Canis lupus familiaris | Prediction | More>> | ||
| 1:1 ortholog | IFT88 | A0A452FFN1 | Capra hircus | Prediction | More>> | |||
| 1:1 ortholog | IFT88 | 8100 | Q13099 | Homo sapiens | Prediction | More>> | ||
| 1:1 ortholog | Ift88 | 21821 | Q61371 | CPO,CLP,CLO | Mus musculus | Publication | More>> | |
| 1:1 ortholog | IFT88 | A0A2I3RWX3 | Pan troglodytes | Prediction | More>> | |||
| 1:1 ortholog | I3LER9 | Sus scrofa | Prediction | More>> | ||||
| 1:1 ortholog | IFT88 | 100009576 | G1SJN9 | Oryctolagus cuniculus | Prediction | More>> | ||
| 1:1 ortholog | Ift88 | 305918 | A0A096MK92 | Rattus norvegicus | Prediction | More>> | ||
| 1:1 ortholog | ift88 | B0UYB0 | Danio rerio | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0002080 | acrosomal membrane |
| GO:0097541 | axonemal basal plate |
| GO:0005930 | axoneme |
| GO:0005814 | centriole |
| GO:0005813 | centrosome |
| GO:0036064 | ciliary basal body |
| GO:0097546 | ciliary base |
| GO:0097542 | ciliary tip |
| GO:0005929 | cilium |
| GO:0005737 | cytoplasm |
| GO:0030992 | intraciliary transport particle B |
| GO:0060091 | kinocilium |
| GO:0031514 | motile cilium |
| GO:0097730 | non-motile cilium |
| GO:0032391 | photoreceptor connecting cilium |
| GO:0036126 | sperm flagellum |
| GO:0019894 | kinesin binding |
| GO:0009887 | animal organ morphogenesis |
| GO:0009952 | anterior/posterior pattern specification |
| GO:0007420 | brain development |
| GO:0055007 | cardiac muscle cell differentiation |
| GO:0060411 | cardiac septum morphogenesis |
| GO:0060271 | cilium assembly |
| GO:0090102 | cochlea development |
| GO:0031122 | cytoplasmic microtubule organization |
| GO:0007368 | determination of left/right symmetry |
| GO:0009953 | dorsal/ventral pattern formation |
| GO:0042733 | embryonic digit morphogenesis |
| GO:0001886 | endothelial cell morphogenesis |
| GO:0036334 | epidermal stem cell homeostasis |
| GO:0008544 | epidermis development |
| GO:0001654 | eye development |
| GO:0048853 | forebrain morphogenesis |
| GO:0007507 | heart development |
| GO:0060914 | heart formation |
| GO:0060122 | inner ear receptor cell stereocilium organization |
| GO:0042073 | intraciliary transport |
| GO:0001822 | kidney development |
| GO:0060173 | limb development |
| GO:0001889 | liver development |
| GO:0030324 | lung development |
| GO:0060426 | lung vasculature development |
| GO:0050680 | negative regulation of epithelial cell proliferation |
| GO:0007399 | nervous system development |
| GO:0061351 | neural precursor cell proliferation |
| GO:1905515 | non-motile cilium assembly |
| GO:0007219 | Notch signaling pathway |
| GO:0031016 | pancreas development |
| GO:0043568 | positive regulation of insulin-like growth factor receptor signaling pathway |
| GO:1903929 | primary palate development |
| GO:0008104 | protein localization |
| GO:2000785 | regulation of autophagosome assembly |
| GO:1902017 | regulation of cilium assembly |
| GO:0045598 | regulation of fat cell differentiation |
| GO:0060259 | regulation of feeding behavior |
| GO:0042487 | regulation of odontogenesis of dentin-containing tooth |
| GO:0070613 | regulation of protein processing |
| GO:0034405 | response to fluid shear stress |
| GO:0007224 | smoothened signaling pathway |
| GO:0007288 | sperm axoneme assembly |
| GO:0007290 | spermatid nucleus elongation |
| GO:0021513 | spinal cord dorsal/ventral patterning |
| GO:0021537 | telencephalon development |