Gene: IFT88

Basic information

Tag Content
Uniprot ID A0A2I3RWX3
Entrez ID
Genbank protein ID
Genbank nucleotide ID
Ensembl protein ID ENSPTRP00000069195
Ensembl nucleotide ID ENSPTRG00000005685
Gene name Intraflagellar transport 88
Gene symbol IFT88
Organism Pan troglodytes
NCBI taxa ID 9598
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MMQNVHLAPE TDEDDLYSGY NDYNPIYDIE ELENDAAFQQ AVRTSHGRRP PVSEKKFFLI 60
SKTSLASSIG RPMTGAIQDG VTRPMTAVRA AGFTKAALRG SAFDPLSQSR GPASPLEAKK 120
KDSPEEKIKQ LEKEVNELVE ESCIANSCGD LKLALEKAKD AGRKERVLVR QREQVTTPEN 180
INLDLTYSVL FNLASQYSVN EMYAEALNTY QVIVKNKMFS NAGILKMNMG NIYLKQRNYS 240
KAIKFYRMAL DQVPSVNKQM RIKIMQNIGV TFIQAGQYSD AINSYEHIMS MAPNLKAGYN 300
LTICYFAVGD REKMKKAFQK LITVPLEIDE DKYISPSDDP HTNLVTEAIK NDHLRQMERE 360
RKAMAEKYIM TSAKLIAPVI ETSFAAGYDW CVEVVKASQY VELANDLEIN KAVTYLRQKD 420
YNQAVEILKV LEKKDSRVKS AAATNLSALY YMGKDFAQAS SYADIAVNSD RYNPAALTNK 480
GNTVFANGDY EKAAEFYKEA LRNDSSCTEA LYNIGLTYEK LNRLDEALDC FLKLHAILRN 540
SAEVLYQIAN IYELMENPSQ AIEWLMQVVS VIPTDPQVLS KLGELYDREG DKSQAFQYYY 600
ESYRYFPCNI EVIEWLGAYY IDTQFWEKAI QYFERASLIQ PTQVKWQLMV ASCFRRSGNY 660
QKALDTYKDT HRKFPENVEC LRFLVRLCTD LGLKDAQEYA RKLKRLEKMK EIREQRIKSG 720
RDGSGGSRGK REGSASGDSG QNYSASSKGE RLSARLRALP GTNEPYESSS NKEIDASYVD 780
PLGPQIERPK TAAKKRIDED DFADEELGDD LLPE 814

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologIFT88514177E1BLX1Bos taurusPredictionMore>>
1:1 orthologIFT88477345E2R838Canis lupus familiarisPredictionMore>>
1:1 orthologIFT88A0A452FFN1Capra hircusPredictionMore>>
1:1 orthologIFT888100Q13099Homo sapiensPredictionMore>>
1:1 orthologIft8821821Q61371CPO,CLP,CLOMus musculusPublicationMore>>
1:1 orthologIFT88A0A2I3RWX3Pan troglodytesPredictionMore>>
1:1 orthologI3LER9Sus scrofaPredictionMore>>
1:1 orthologIFT88100009576G1SJN9Oryctolagus cuniculusPredictionMore>>
1:1 orthologIft88305918A0A096MK92Rattus norvegicusPredictionMore>>
1:1 orthologift88B0UYB0Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term

Functional annotations

Keywords

Keyword ID Keyword Term
KW-1185 Reference proteome
KW-0802 TPR repeat

Interpro

InterPro ID InterPro Term
IPR006597 Sel1-like
IPR013026 TPR-contain_dom
IPR011990 TPR-like_helical_dom_sf
IPR019734 TPR_repeat

PROSITE

PROSITE ID PROSITE Term
PS50005 TPR
PS50293 TPR_REGION

Pfam

Pfam ID Pfam Term
PF13174 TPR_6
PF13181 TPR_8