Gene: IFT88

Basic information

Tag Content
Uniprot ID A0A452FFN1
Entrez ID
Genbank protein ID
Genbank nucleotide ID
Ensembl protein ID ENSCHIP00000023168
Ensembl nucleotide ID ENSCHIG00000020831
Gene name Uncharacterized protein
Gene symbol IFT88
Organism Capra hircus
NCBI taxa ID 9925
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MMQNVHLAPE TDEDDLYSGY NDYNPTYDTE ELENDTAFQQ AVRTSHGRRP PSKTSLVSSM 60
GRPMTGAIQD GVTRPMTAVR AAGFTKGALR GSAFDPLGQS WGPAPPLEAR SEDSPEEKIR 120
QLEKKVNELV EESCIANSCG DLKLALEKAK DAGRKERVLV RQREQVTRPE NINLDLTYSV 180
LFNLASQYSA NEMYAEALNT YQVIVKNKMF SNAGRLKVNM GNIYLKQRNY SKAIKFYRMA 240
LDQIPSVHKE MRIKIMQNIG VTFIKTGQYS DAISSFEHIM SMAPNLKAGF NLILSYFAIG 300
DREKMKKSFQ KLIAVPLEID EDDKYISPSD DPHTNLVIEA IKNDHLRQME RERKAMAEKY 360
IMTAAKLIAP VIETSFAVGY DWCVEVVKAS QYVELANDLE INKAITYLRQ KDFNQAVETL 420
KMFEKKDSRV KSAAATNLSF LYYLENEFAQ ASSYADLAVN SDRYNPSALT NKGNTVFASG 480
DYEKAAEFYK EALRNDCSCT EALYNIGLTY KKLNRLDEAL DCFLKLHAIL RNSAQVLYQI 540
ANVYELMEDP SQAMEWLMQL ISVVPTDSRA LSKLGGLYDS EGDKSQAFQY YYESYRYFPS 600
NIEVIEWLGA YYIDTQFCEK AIQYFERASL IQPTQVKWQL MVASCFRRSG NYQKALDTYK 660
DIHRKFPENV ECLRFLVRLC TDIGLKEVQE YATKLKRLEK MKEIREQRIK SGRDSSGCPR 720
GRRDGSAGSD SGQNCSAGSK GERLSAQLRA LPGTDEPYES SSNKEPDASY VDPLGPQIER 780
PKTAAKKRME EDDFADEELG DDLLPE 806

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologIFT88514177E1BLX1Bos taurusPredictionMore>>
1:1 orthologIFT88477345E2R838Canis lupus familiarisPredictionMore>>
1:1 orthologIFT88A0A452FFN1Capra hircusPredictionMore>>
1:1 orthologIFT888100Q13099Homo sapiensPredictionMore>>
1:1 orthologIft8821821Q61371CPO,CLP,CLOMus musculusPublicationMore>>
1:1 orthologIFT88A0A2I3RWX3Pan troglodytesPredictionMore>>
1:1 orthologI3LER9Sus scrofaPredictionMore>>
1:1 orthologIFT88100009576G1SJN9Oryctolagus cuniculusPredictionMore>>
1:1 orthologIft88305918A0A096MK92Rattus norvegicusPredictionMore>>
1:1 orthologift88B0UYB0Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term

Functional annotations

Keywords

Keyword ID Keyword Term
KW-1185 Reference proteome
KW-0802 TPR repeat

Interpro

InterPro ID InterPro Term
IPR013026 TPR-contain_dom
IPR011990 TPR-like_helical_dom_sf
IPR019734 TPR_repeat

PROSITE

PROSITE ID PROSITE Term
PS50005 TPR
PS50293 TPR_REGION

Pfam

Pfam ID Pfam Term
PF13174 TPR_6
PF13181 TPR_8