Gene: pmpca

Basic information

Tag Content
Uniprot ID A0A0R4IFK9
Entrez ID
Genbank protein ID
Genbank nucleotide ID
Ensembl protein ID ENSDARP00000132105
Ensembl nucleotide ID ENSDARG00000102607
Gene name Alpha-MPP
Gene symbol pmpca
Organism Danio rerio
NCBI taxa ID 7955
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description Substrate recognition and binding subunit of the essential mitochondrial processing protease (MPP), which cleaves the mitochondrial sequence off newly imported precursors proteins.
Sequence
MAAHMSRLRG WSRAQRYGIA VCRQYSSGSS YPNVSLSTPL PGIPKPVFAS VDGHEKYETK 60
ITTLENGLKI ASQNKFGQFC TVGILVNSGS RHEAKYPSGI AHFLEKLSFS STAQFGSKDE 120
ILLTLEKHGG ICDCQTSRDT TMYAVSAEVK GLDTVVHLLS DAVLQPRLLD EEIEMARMAV 180
RFELEDLNMR PDPEPLLTEM IHAAAYRGNT VGLPRFSPAD NVEKIDKKLL HKYLQSYYCP 240
ERMVLAGVGI EHEQLVQCAR KYLLNVQPVW GESKPANVDR SVAQYTGGIV KMVKDMSDVS 300
LGPTPIPELT HIMIGLESCS FLEEDFIPFA VLNMMMGGGG SFSAGGPGKG MFTRLYLNVL 360
NRHHWMYNAT SYHHSYEDSG LLCIHASADP RQVREMVEII TREFIQMTGT AGEMELERAK 420
TQLKSMLMMN LESRPVIFED VGRQVLATGK RKLPHELCEL ISTVTASDIK RVTMKMLRSK 480
PAVAALGDLT ELPSYEDIQA ALSSKDGRLP RIYRLFR 517

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologPMPCA767847Q0P5M8Bos taurusPredictionMore>>
1:1 orthologPMPCA480677F1PF09Canis lupus familiarisPredictionMore>>
1:1 orthologPMPCA102171796A0A452EEL9Capra hircusPredictionMore>>
1:1 orthologPMPCA23203Q10713Homo sapiensPredictionMore>>
1:1 orthologPmpca66865Q9DC61CPOMus musculusPublicationMore>>
1:1 orthologPMPCAH2QY64Pan troglodytesPredictionMore>>
1:1 orthologPMPCAA0A5G2Q8L1Sus scrofaPredictionMore>>
1:1 orthologPmpca296588Q68FX8Rattus norvegicusPredictionMore>>
1:1 orthologpmpcaA0A0R4IFK9Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005743 mitochondrial inner membrane
GO:0005759 mitochondrial matrix
GO:0005739 mitochondrion
GO:0046872 metal ion binding
GO:0006627 protein processing involved in protein targeting to mitochondrion

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0472 Membrane
KW-0496 Mitochondrion
KW-0999 Mitochondrion inner membrane
KW-1267 Proteomics identification
KW-1185 Reference proteome
KW-0809 Transit peptide

Interpro

InterPro ID InterPro Term
IPR011249 Metalloenz_LuxS/M16
IPR011765 Pept_M16_N
IPR001431 Pept_M16_Zn_BS
IPR007863 Peptidase_M16_C
IPR037715 PMPCA

PROSITE

PROSITE ID PROSITE Term
PS00143 INSULINASE

Pfam

Pfam ID Pfam Term
PF00675 Peptidase_M16
PF05193 Peptidase_M16_C