Gene: Pmpca

Basic information

Tag Content
Uniprot ID Q68FX8
Entrez ID 296588
Genbank protein ID EDL93500.1; AAH79004.1;
Genbank nucleotide ID NM_001003673.1
Ensembl protein ID ENSRNOP00000037642
Ensembl nucleotide ID ENSRNOG00000026775
Gene name Mitochondrial-processing peptidase subunit alpha
Gene symbol Pmpca
Organism Rattus norvegicus
NCBI taxa ID 10116
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MATAVWAAAR LLRGSAALCA RPKFGSPAHR RFSSGATYPN IPLSSPLPGV PKPIFATVDG 60
QEKFETKVTT LDNGLRVASQ NKFGQFCTLG ILINSGSRYE AKYLSGIAHF LEKLAFSSTA 120
RFDSKDEILL TLEKHGGICD CQTSRDTTMY AVSADSKGLD TVVGLLADVV LHPRLTDEEI 180
EMTRMAVQFE LEDLNMRPDP EPLLTEMIHE AAFRENTVGL HRFCPVENIG KIDREVLHSY 240
LKNYYTPDRM VLAGVGVEHE HLVECARKYL LGVQPAWGAP GAVDVDSSVA QYTGGIIKVE 300
RDMSNVSLGP TPIPELTHIM VGLESCSFLE EDFIPFAVLN MMMGGGGSFS AGGPGKGMFS 360
RLYLNVLNRH HWMYNATSYH HSYEDTGLLC IHASADPRQV REMVEIITKE FILMGRTVDL 420
VELERAKTQL MSMLMMNLES RPVIFEDVGR QVLATHSRKL PHELCTLIRN VKPEDIKRVA 480
SKMLRGKPAV AALGDLTDLP TYEHIQAALS SRDGRLPRTY RLFR 524

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologPMPCA767847Q0P5M8Bos taurusPredictionMore>>
1:1 orthologPMPCA480677F1PF09Canis lupus familiarisPredictionMore>>
1:1 orthologPMPCA102171796A0A452EEL9Capra hircusPredictionMore>>
1:1 orthologPMPCA23203Q10713Homo sapiensPredictionMore>>
1:1 orthologPmpca66865Q9DC61CPOMus musculusPublicationMore>>
1:1 orthologPMPCAH2QY64Pan troglodytesPredictionMore>>
1:1 orthologPMPCAA0A5G2Q8L1Sus scrofaPredictionMore>>
1:1 orthologPmpca296588Q68FX8Rattus norvegicusPredictionMore>>
1:1 orthologpmpcaA0A0R4IFK9Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005743 mitochondrial inner membrane
GO:0046872 metal ion binding
GO:0004222 metalloendopeptidase activity
GO:0006627 protein processing involved in protein targeting to mitochondrion

Functional annotations

Keywords

Keyword ID Keyword Term
KW-1267 Proteomics identification
KW-1185 Reference proteome

Interpro

InterPro ID InterPro Term
IPR011249 Metalloenz_LuxS/M16
IPR011765 Pept_M16_N
IPR001431 Pept_M16_Zn_BS
IPR007863 Peptidase_M16_C
IPR037715 PMPCA

PROSITE

PROSITE ID PROSITE Term
PS00143 INSULINASE

Pfam

Pfam ID Pfam Term
PF00675 Peptidase_M16
PF05193 Peptidase_M16_C