| Tag | Content |
|---|---|
| Uniprot ID | A0A2I3RPT1; A0A2J8MHR6; |
| Entrez ID | |
| Genbank protein ID | |
| Genbank nucleotide ID | |
| Ensembl protein ID | ENSPTRP00000066328 |
| Ensembl nucleotide ID | ENSPTRG00000001017 |
| Gene name | Collagen type XI alpha 1 chain |
| Gene symbol | COL11A1 |
| Organism | Pan troglodytes |
| NCBI taxa ID | 9598 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | MEPWSSRWKT KRWLWDFTVT TLALTFLFQA REVRGAAPVD VLKALDFHNS PEGISKTTGF 60 CTNRKNSKGS DTAYRVSKQA QLSAPTKQLF PGGTFPEDFS ILFTVKPKKG IQSFLLSIYN 120 EHGIQQIGVE VGRSPVFLFE DHTGKPAPED YPLFRTVNIA DGKWHRVAIS VEKKTVTMIV 180 DCKKKTTKPL DRSERAIVDT NGITVFGTRI LDEEVFEGDI QQFLITGDPK AAYDYCEHYS 240 PDCDSSAPKA AQAQEPQIDE YAPEDIIEYD YEYGEAEYKE AESITEGPTV TEETIAQTEI 300 NGHGAYGEKG QKGEPAVVEP GMLVEGPPGP AGPAGIMGPP GLQGPTGPPG DPGDRGPPGR 360 PGLPGADGLP GPPGTMLMLP FRYGGDGSKG PTISAQEAQA QAILQQARIA LRGPPGPMGL 420 TGRPGPVGGP GSSGAKGESG DPGPQGPRGV QGPPGPTGKP GKRGRPGADG GRGMPGEPGA 480 KGDRGFDGLP GLPGDKGHRG ERGPQGPPGP PGDDGMRGED GEIGPRGLPG EAGPRGLLGP 540 RGTPGAPGQP GMAGVDGPPG PKGNMGPQGE PGPPGQQGNP GPQGLPGPQG PIGPPGEKGP 600 QGKPGLAGLP GADGPPGHPG KEGQSGEKGA LGPPGPQGPI GYPGPRGVKG ADGVRGLKGS 660 KGEKGEDGFP GFKGDMGLKG DRGEVGQIGP RGEDGPEGPK GRAGPTGDPG PSGQAGEKGK 720 LGVPGLPGYP GRQGPKGSTG FPGFPGANGE KGARGVAGKP GPRGQRGPTG PRGSRGARGP 780 TGKPGPKGTS GGDGPPGPPG ERGPQGPQGP VGFPGPKGPP GPPGKDGLPG HPGQRGETGF 840 QGKTGPPGPG GVVGPQGPTG ETGPIGERGH PGPPGPPGEQ GLPGAAGKEG AKGDPGPQGI 900 SGKDGPAGLR GFPGERGLPG AQGAPGLKGG EGPQGPPGPV GSPGERGSAG TAGPIGLPGR 960 PGPQGPPGPA GEKGAPGEKG PQGPAGRDGV QGPVGLPGPA GPAGSPGEDG DKGEIGEPGQ 1020 KGSKGDKGEN GPPGPPGLQG PVGAPGIAGG DGEPGPRGQQ GMFGQKGDEG ARGFPGPPGP 1080 IGLQGLPGPP GEKGENGDVG PMGPPGPPGP RGPQGPNGAD GPQGPPGSVG SVGGVGEKGE 1140 PGEAGNPGPP GEAGVGGPKG ERGEKGEAGP PGAAGPPGAK GPPGDDGPKG NPGPVGFPGD 1200 PGPPGEPGPA GQDGVGGDKG EDGDPGQPGP PGPSGEAGPP GPPGKRGPPG AAGAEGRQGE 1260 KGAKGEAGAE GPPGKTGPVG PQGPAGKPGP EGLRGIPGPV GEQGLPGAAG QDGPPGPMGP 1320 PGLPGLKGDP GSKGEKGHPG LIGLIGPPGE QGEKGDRGLP GTQGSPGAKG DGGIPGPAGP 1380 LGPPGPPGLP GPQGPKGNKG STGPAGQKGD SGLPGPPGPP GPPGEVIQPL PILSSKKTRR 1440 HTEGMQADAD DNILDYSDGM EEIFGSLNSL KQDIEHMKFP MGTQTNPART CKDLQLSHPD 1500 FPDGEYWIDP NQGCSGDSFK VYCNFTSGGE TCIYPDKKSE GVRISSWPKE KPGSWFSEFK 1560 RGKLLSYLDV EGNSINMVQM TFLKLLTASA RQNFTYHCHQ SAAWYDVSSG SYDKALRFLG 1620 SNDEEMSYDN NPFIKALYDG CASRKGYEKT VIEINTPKID QVPIVDVMIN DFGDQNQKFG 1680 FEVGPVCFLG |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | COL11A1 | 100685969 | J9NYK4 | Canis lupus familiaris | Prediction | More>> | ||
| 1:1 ortholog | COL11A1 | A0A452ECM1 | Capra hircus | Prediction | More>> | |||
| 1:1 ortholog | COL11A1 | 1301 | P12107 | Homo sapiens | Prediction | More>> | ||
| 1:1 ortholog | Col11a1 | 12814 | Q61245 | CPO | E14.5 | Mus musculus | Publication | More>> |
| 1:1 ortholog | COL11A1 | A0A2I3RPT1 | Pan troglodytes | Prediction | More>> | |||
| 1:1 ortholog | COL11A1 | 100349413 | G1T5B6 | Oryctolagus cuniculus | Prediction | More>> | ||
| 1:1 ortholog | Col11a1 | 25654 | P20909 | Rattus norvegicus | Prediction | More>> | ||
| 1:1 ortholog | col11a1a | 565402 | A2RUX5 | Danio rerio | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0005201 | extracellular matrix structural constituent |
| Keyword ID | Keyword Term |
|---|---|
| KW-1185 | Reference proteome |
| PROSITE ID | PROSITE Term |
|---|---|
| PS51461 | NC1_FIB |