Gene: COL11A1

Basic information

Tag Content
Uniprot ID A0A452ECM1
Entrez ID
Genbank protein ID
Genbank nucleotide ID
Ensembl protein ID ENSCHIP00000009705
Ensembl nucleotide ID ENSCHIG00000012424
Gene name Uncharacterized protein
Gene symbol COL11A1
Organism Capra hircus
NCBI taxa ID 9925
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MERWSSRWKT KRWLWDFTIT TLALTFLFQA REVRGAAPVD VLKALDFHNS PEGISKTTGF 60
CTNRKNSKDS DTAFRVSKQA QLSAPTKQLF SGGTFPEDFS ILFTIKPKKG IQSFLLSIYN 120
EHGIQQVGVE VGRSPVFLYE DHTGKPAPED YPLFRTVNIA DGKWHRVAIS VEKKTVTMIV 180
DCKKKTTKPL DRSEKAIVDT NGIMVFGTRI LDEEVFEGDI QQLLIIGDPK AAYDYCEHYS 240
PDCDSSAPKA AQAQEPQVDE YAPEDIMEYD YEYGEAEYKE AESVTESPTV TEETIAQTEA 300
NIVDDFQDYN YGTESYQTEA PRSVSGSNEI NGHGAYGEKG QKGEPAVVEP GMLIEGPPGP 360
AGPAGLMGPP GLQGPTGPPG DPGERGPPGR PGLPGADGLP GPPGTMLVLP FRYGGDSSKG 420
PTVSAQEAQA QAILQQARIA LRGPPGPMGL TGRPGPVGGP GSSGAKGEMG DPGPQGPRGV 480
QGPPGPTGKP GKRGRPGADG GRGMPGEPGA KGDRGFDGLP GLPGDKGHRG ERGPQGPPGP 540
PGEDGMRGED GEIGPRGLPG EAGPRGLLGP RGTPGPIGQP GIAGVDGPPG PKGNMGPQGE 600
PGPPGQQGNP GPQGLPGPQG PIGPPGEKGP QGKPGLAGLP GADGPPGHPG KEGQSGEKGS 660
LGPPGPQGPI GYPGPRGVKG ADGVRGLKGS KGEKGEDGFP GFKGDMGLKG DRGEVGQVGP 720
RGEDGPEGPK GRAGPTGDPG PPGQAGEKGK LGVPGLPGYP GRQGPKGSTG FPGFPGANGE 780
KGARGVAGKP GPRGQRGPTG PRGSRGARGP TGKPGPKGTS GGDGPPGPPG ERGPQGPQGP 840
VGFPGPKGPP GPPGKDGLPG HPGQRGETGF QGKTGPPGPG GVVGPQGPTG ETGPIGERGH 900
PGPPGPPGEQ GLPGAAGKEG AKGDPGPQGV SGKDGPAGLR GFPGERGLPG AQGAPGLKGG 960
EGPQGPPGPV GSPGERGSAG TAGPIGLPGR PGPQGPPGPA GEKGAPGEKG PQGPAGRDGV 1020
QGPVGLPGPA GPAGSPGEDG DKGEIGEPGQ KGSKGDKGEN GPPGPPGLQG PVGAPGIAGG 1080
DGEPGPRGQQ GMFGQKGDEG ARGFPGPPGP IGLQGLPGPP GEKGENGDVG PMGPPGPPGP 1140
RGPQGPNGAD GPQGPPGSIG SVGGVGEKGE PGEAGNPGPP GEAGTGGPKG ERGEKGEAGP 1200
PGAAGPPGAK GPPGDDGPKG NPVSDLGPLQ SDIYGKAP 1238

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologCOL11A1100685969J9NYK4Canis lupus familiarisPredictionMore>>
1:1 orthologCOL11A1A0A452ECM1Capra hircusPredictionMore>>
1:1 orthologCOL11A11301P12107Homo sapiensPredictionMore>>
1:1 orthologCol11a112814Q61245CPOE14.5Mus musculusPublicationMore>>
1:1 orthologCOL11A1A0A2I3RPT1Pan troglodytesPredictionMore>>
1:1 orthologCOL11A1100349413G1T5B6Oryctolagus cuniculusPredictionMore>>
1:1 orthologCol11a125654P20909Rattus norvegicusPredictionMore>>
1:1 orthologcol11a1a565402A2RUX5Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term

Functional annotations

Keywords

Keyword ID Keyword Term
KW-1185 Reference proteome

Interpro

InterPro ID InterPro Term
IPR008160 Collagen
IPR013320 ConA-like_dom_sf
IPR001791 Laminin_G

PROSITE

PROSITE ID PROSITE Term

Pfam

Pfam ID Pfam Term
PF01391 Collagen
PF02210 Laminin_G_2