| Tag | Content |
|---|---|
| Uniprot ID | J9NYK4 |
| Entrez ID | 100685969 |
| Genbank protein ID | |
| Genbank nucleotide ID | XM_005621854.2 |
| Ensembl protein ID | ENSCAFP00000038373 |
| Ensembl nucleotide ID | ENSCAFG00000019985 |
| Gene name | Collagen type XI alpha 1 chain |
| Gene symbol | COL11A1 |
| Organism | Canis lupus familiaris |
| NCBI taxa ID | 9615 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | MERRPSRWRT RRWPWGLTAA ALALTCLLQA AGVGGAAPVD VLKALDFHNS PEGITKTTGF 60 CTNRKNSKDS DTAYRVSKQA QLSAPTKQLF SGGAFPEDFS ILFTIKPKKG IQSFLLSIYN 120 EHGIQQIGVE VGRSPVFLFE DHTGKPAPED YPLFRTVNIA DGKWHRVAIS VEKKTVTMIV 180 DCKKKTTKPL DRSERAIVDT NGITVFGTRI LDEEVFEGDI QQLLIIGDPK AAYDYCEHYS 240 PDCDSSVPKA AQAQEPQIDE YAPEDIMEYD YEYGEAEYKE AEFVTETPTV TEETIAQTEA 300 NIVDDFQEYN YGTEESYQTV APRHVSGPNE PNPVEEVFTE EYLTGEDYDS QRKNSEDTLY 360 ENKGIDGRDS DLLVDGDLGE YDFYEYKEYE DKPTSPTNEE FGPGVPAETD ITETSINSHG 420 GYGEKGQKGE PAVVEPGMLI EGPPGPAGPA GLMGPPGLQG PTGPPGDPGE RGPPGRPGLP 480 GADGLPGPPG TMLMLPFRYG GDGSKGPTIS AQEAQAQAIL QQARIALRGP PGPMGLTGRP 540 GPVGGPGSSG AKGESGDPGP QGPRGVQGPP GPTGKPGKRG RPGADGGRGM PGEPGAKGDR 600 GFDGLPGLPG DKGHRGERGP QGPPGPPGED GMRGEDGEIG PRGLPGEAGP RGLLGPRGTP 660 GPTGQPGIAG VDGPPGPKGN MGPQGEPGPP GQQGNPGPQG LPGPQGPIGP PGEKGPQGKP 720 GLAGLPGADG PPGHPGKEGQ SGEKGALGPP GPQGPIGYPG PRGVKGADGV RGLKGSKGEK 780 GEDGFPGFKG DMGLKGDRGE VGQVGPRGED GPEGPKGRAG PTGDPGPSGQ AGEKGKLGVP 840 GLPGYPGRQG PKGSTGFPGF PGANGEKGAR GVAGKPGPRG QRGPTGPRGS RGARGPTGKP 900 GPKGTSGGDG PPGPPGERGP QGPQGPVGFP GPKGPPGPPG KDGLPGHPGQ RGETGFQGKT 960 GPPGPGGVVG PQGPTGETGP IGERGHPGPP GPPGEQGLPG AAGKEGAKGD PGPQGISGKD 1020 GPAGLRGFPG ERGLPGAQGA PGLKGGEGPQ GPPGPVGSPG ERGSAGTAGP IGLPGRPGPQ 1080 GPPGPAGEKG APGEKGPQGP AGRDGVQGPV GLPGPAGPAG SPGEDGDKGE IGEPGQKGSK 1140 GDKGENGPPG PPGLQGPVGA PGIAGGDGEP GPRGQQGMFG QKGDEGARGF PGPPGPIGLQ 1200 GLPGPPGEKG ENGDVGPMGP PGPPGPRGPQ GPNGADGPQG PPGSIGSVGG VGEKGEPGEA 1260 GNPGPPGEAG TGGPKGERGE KGEAGPPGAA GPPGAKGPPG DDGPKGNPGP VGFPGDPGPP 1320 GEPGPAGQDG VGGDKGEDGD PGQPGPPGPS GEAGPPGPPG KRGPPGAAGA EGRQGEKGAK 1380 GEAGAEGPPG KTGPVGPQGP AGKPGPEGLR GIPGPVGEQG LPGAAGQDGP PGPMGPPGLP 1440 GLKGDPGSKG EKGHPGLIGL IGPPGEQGEK GDRGLPGTQG SPGAKGDGGI PGPAGPIGPP 1500 GPPGLPGPQG PKGTKGSAGP AGQKGDSGLP GPPGPPGPPG EVIQPLPILS PKKTRRHAEN 1560 MQADAGDNIL DYSDGMEEIF GSLNSLKQDI EHMKFPMGTQ TNPARTCKDL QLSHPDFPDG 1620 EYWIDPNQGC SGDSFKVYCN FTSGGETCIY PDKKSEGVRI SSWPKEKPGS WFSEFKRGKL 1680 LSYLDVEGNS INMVQMTFLK LLTASARQNF TYTCHQSAAW YDVSSGSYDK ALRFLGSNDE 1740 EMSYDNNPYI KALYDGCASR KGYDKTVIEI NTPKIDQVPI VDVMINDFGD QNQKFGFEVG 1800 PVCFLG 1806 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | COL11A1 | 100685969 | J9NYK4 | Canis lupus familiaris | Prediction | More>> | ||
| 1:1 ortholog | COL11A1 | A0A452ECM1 | Capra hircus | Prediction | More>> | |||
| 1:1 ortholog | COL11A1 | 1301 | P12107 | Homo sapiens | Prediction | More>> | ||
| 1:1 ortholog | Col11a1 | 12814 | Q61245 | CPO | E14.5 | Mus musculus | Publication | More>> |
| 1:1 ortholog | COL11A1 | A0A2I3RPT1 | Pan troglodytes | Prediction | More>> | |||
| 1:1 ortholog | COL11A1 | 100349413 | G1T5B6 | Oryctolagus cuniculus | Prediction | More>> | ||
| 1:1 ortholog | Col11a1 | 25654 | P20909 | Rattus norvegicus | Prediction | More>> | ||
| 1:1 ortholog | col11a1a | 565402 | A2RUX5 | Danio rerio | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0005592 | collagen type XI trimer |
| GO:0031012 | extracellular matrix |
| GO:0005615 | extracellular space |
| GO:0005201 | extracellular matrix structural constituent |
| GO:0030198 | extracellular matrix organization |
| PROSITE ID | PROSITE Term |
|---|---|
| PS51461 | NC1_FIB |