| Tag | Content |
|---|---|
| Uniprot ID | G1T5B6 |
| Entrez ID | 100349413 |
| Genbank protein ID | |
| Genbank nucleotide ID | XM_008264806.2 |
| Ensembl protein ID | ENSOCUP00000011528 |
| Ensembl nucleotide ID | ENSOCUG00000013367 |
| Gene name | Collagen type XI alpha 1 chain |
| Gene symbol | COL11A1 |
| Organism | Oryctolagus cuniculus |
| NCBI taxa ID | 9986 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | MEPWSSRWKT KRWLWDFTVT TLALTFLFQA REVRGGAPVD VLKALDFHNS PEGISKTTGF 60 CTNRKDSKGS DTAYRVSKLA QLSAPTKQLF PGGSFPEDFS ILFTVKPKKG IQSFLLSIYN 120 EHGIQQLGVE VGRSPVFLFE DHTGKPAPED YPLFRTVNIA DGKWHRVAIS VEKKTVTMIV 180 DCKKKTTKPL DRSERAIVDT NGITVFGTRI LDEEVFEGDI QQLLITGDPK AAYDYCEHYS 240 PDCDSSAPNA AQAQEPQIDE YAPEDIIEYD YEYGEAEYKE AESVTERPTV TEETIAQTEA 300 NIVDDFQEYN YGTMESYQTE APRRVSGSNE PNPVEDVFTE EYLTGEDYDS QRKNSEDTVY 360 ESKGIDGRDS DLLVDGDLGE YDFYEYKEYE DKPTSSPNEE FGPGVPAETD ITETSINGHG 420 AYGEKGQKGE PAVVEPGMLV EGPPGPAGPA GLMGPPGLQG PSGPPGDPGD RGPPGRPGLP 480 GADGLPGPPG TMLMLPFRYG GDGSKGPTIS AQEAQAQAIL QQARIALRGP PGPMGLTGRP 540 GPVGGPGSAG AKGESGDPGP QGPRGVQGPP GPTGKPGKRG RPGADGGRGM PGEPGAKGDR 600 GFDGLPGLPG DKGHRGERGP QGPPGPPGDD GMRGEDGEIG PRGLPGEAGP RGLLGPRGTP 660 GPPGQPGIAG VDGPPGPKGN MGPQGEPGPP GQQGNPGPQG LPGPQGPIGP PGEKGPQGKP 720 GLAGLPGADG PPGHPGKEGQ SGEKGALGPP GPQGPIGYPG PRGVKGADGV RGLKGSKGEK 780 GEDGFPGFKG DMGLKGDRGE VGQIGPRGED GPEGPKGRAG PTGDPGPSGQ AGEKGKLGVP 840 GLPGYPGRQG PKGSTGFPGF PGANGEKGAR GVAGKPGPRG QRGPTGPRGS RGARGPTGKP 900 GPKGTSGGDG PPGPPGERGP QGPQGPVGFP GPKGPPGPPG KDGLPGHPGQ RGETGFQGKT 960 GPPGPGGVVG PQGPTGETGP IGERGHPGPP GPPGEQGLPG AAGKEGAKGD PGPQGVSGKD 1020 GPAGLRGFPG ERGLPGAQGA PGLKGGEGPQ GPPGPVGSPG ERGSAGTAGP IGLPGRPGPQ 1080 GPPGPAGEKG APGEKGPQGP AGRDGVQGPV GLPGPAGPAG SPGEDGDKGE IGEPGQKGSK 1140 GDKGENGPPG PPGLQGPVGA PGIAGGDGEP GPRGQQGMFG QKGDEGARGF PGPPGPIGLQ 1200 GLPGPPGEKG ENGDVGPMGP PGPPGPRGPQ GPNGADGPQG PPGSIGSVGG VGEKGEPGEA 1260 GNPGPPGEAG SGGPKGERGE KGEAGPPGAA GPPGAKGPPG DDGPKGNPGP VGFPGDPGPP 1320 GEPGPAGQDG VGGDKGEDGD PGQPGPPGPS GEAGPPGPPG KRGPPGAAGA EGRQGEKGAK 1380 GEAGAEGPPG KTGPVGPQGP AGKPGPEGLR GIPGPVGEQG LPGAAGQDGP PGPMGPPGLP 1440 GLKGDPGSKG EKGHPGLIGL IGPPGEQGEK GDRGLPGTQG SPGAKGDGGI PGPAGPIGPP 1500 GPPGLPGPQG PKGNKGSTGP AGQKGDSGLP GPPGPPGPPG EVIQPLPILS PKKTRRHTEG 1560 MQADAQDNIL DYSDGMEEIF GSLNSLKQDI EHMKFPMGTQ TNPARTCKDL QLSHPDFPDG 1620 EYWIDPNQGC SGDSFKVYCN FTAGGETCIY PDKKSEGVRI SSWPKETPGS WFSEFKRGKL 1680 LSYVDVEGNS INMVQMTFLK LLTASARQNF TYHCHQSAAW YDVLSGSYDK ALRFLGSNDE 1740 EMSHDNNPYI KALDDGCASR KGYGKTVIEI NTPKIDQVPI IDVMINDFGD HNQKFGFEVS 1800 AVCFLG 1806 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | COL11A1 | 100685969 | J9NYK4 | Canis lupus familiaris | Prediction | More>> | ||
| 1:1 ortholog | COL11A1 | A0A452ECM1 | Capra hircus | Prediction | More>> | |||
| 1:1 ortholog | COL11A1 | 1301 | P12107 | Homo sapiens | Prediction | More>> | ||
| 1:1 ortholog | Col11a1 | 12814 | Q61245 | CPO | E14.5 | Mus musculus | Publication | More>> |
| 1:1 ortholog | COL11A1 | A0A2I3RPT1 | Pan troglodytes | Prediction | More>> | |||
| 1:1 ortholog | COL11A1 | 100349413 | G1T5B6 | Oryctolagus cuniculus | Prediction | More>> | ||
| 1:1 ortholog | Col11a1 | 25654 | P20909 | Rattus norvegicus | Prediction | More>> | ||
| 1:1 ortholog | col11a1a | 565402 | A2RUX5 | Danio rerio | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0005201 | extracellular matrix structural constituent |
| Keyword ID | Keyword Term |
|---|---|
| KW-1185 | Reference proteome |
| PROSITE ID | PROSITE Term |
|---|---|
| PS51461 | NC1_FIB |