| Tag | Content |
|---|---|
| Uniprot ID | A2RUX5 |
| Entrez ID | 565402 |
| Genbank protein ID | AAI33084.1 |
| Genbank nucleotide ID | NM_001083844.1 |
| Ensembl protein ID | ENSDARP00000042064 |
| Ensembl nucleotide ID | ENSDARG00000026165 |
| Gene name | Collagen, type XI, alpha 1a |
| Gene symbol | col11a1a |
| Organism | Danio rerio |
| NCBI taxa ID | 7955 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | MERPRWSPMW KTKRWLLDST VFKLITVSLV LVLQAPHVRA EPVDVLKVLE FPTVPEGVEK 60 TSGFCTNRRA SQPDAAYKIS KNAQLSAPTK QLFPDGVFPE DFSILTTIKP KAGIQSFLLS 120 IYNEKGVQQL GVEVGRSPVF LYEDQEGKPA PEDYPLFRAL NLADGKWHRV GISVEKKTVT 180 IVVDCKKKLT KPLGRSDHAS IDTKGITVFG TRILDEESFE GDIQQLLIVA DPKAAYDYCE 240 HYSPDCDVPH KDTLQAQEPG EEYTTPVEYG DLYDYYEGGT PTATDEFSEP QRVKRSVSMK 300 SKRTKKSPKS FAKPYKYLEP KQAKKLVPKK KRYGYLPPTP RQAILGLGGG AALGQKGEKG 360 EPAVIEPGML IEGPSGPPGP AGLPGPPGLQ GPPGLAGDPG DRGPPGRAGL PGADGLPGPP 420 GTMLMLPFRF GGDGEKGPVV SAQEAQAQAI LSQARLAMRG PPGPMGLTGR SGPVGLPGPP 480 GLKGESGDHG PQGPRGIQGP PGQIGKPGKR GRAGADGARG MPGESGSKGD RGFDGLPGLP 540 GEKGHRGETG PAGPPGPTGE DGPRGEDGEI GPRGLAGESG PRGLLGPRGP PGPPGQPGIA 600 GVDGPQGPKG NMGPQGEPGP PGQQGIPGGQ GLPGPQGPIG PPGEKGPQGR SGLPGLPGAD 660 GPPGHPGKEG PPGEKGALGQ PGPQGPIGYP GPRGVKGADG VRGLKGGKGE KGEDGFPGFK 720 GDMGLKGDRG ELGLAGPRGE DGPEGPKGRA GPNGESGPQG SAGEKGKLGV PGLPGYPGRQ 780 GPKGSTGFPG FPGANGEKGG RGVAGKAGPR GQRGPTGPRG ARGARGPTGK PGPKGTAGND 840 GPPGPPGERG PQGPQGPVGF PGPKGPPGPP GKDGLPGHPG QRGETGFQGK TGPPGPGGVV 900 GPQGPTGETG PIGERGHPGP PGPPGEQGLP GAGGKEGAKG DPGPQGSPGK DGPPGLRGFP 960 GERGLPGVTG PPGLKGAEGP QGPPGPVGSP GERGAAGSAG PIGLPGRTGP QGPPGPAGEK 1020 GAPGERGPLG PAGRDGVQGP VGLPGPAGPQ GPPGEDGDKG EVGEPGQKGS KADKGEQGPP 1080 GPPGLQGPIG APGPAGADGE PGPRGQQGMF GQKGDEGSRG FPGPPGPIGL QGLPGPPGEK 1140 GENGDVGPMG PPGPPGPRGP QGPPGADGPQ GPPGGIGGMG AVGEKGEQGE AGNPGPPGEP 1200 GPGGPKGERG EKGEAGPPGA AGPAGPKGPP GDDGPKGNPG PVGFPGDPGP PGEPGVAGID 1260 GGPGEKGEDG ESGQPGPPGP SGEAGPPGPP GKRGPPGAHG AEGRQGEKGA KGEAGLEGPP 1320 GKTGPVGPQG PSGKPGPEGL RGIPGPVGEQ GLPGAPGQDG PPGPMGPPGL PGLKGDPGSK 1380 GEKGHPGLIG LIGPPGEQGE KGDRGLPGPQ GAAGSKGDNG ISGASGPIGP PGPPGLPGPQ 1440 GPKGSKGSTG PAGQKGDTGT VGPPGPPGPP GEVIQPLPIH SPKKSRRSID MQADEAGTML 1500 DYGEGMEDIF SSLNNLKQDI ERMKYPMGTQ NNPARSCKDL QLAHPEFPDG EYYIDPNQGC 1560 SGDSFKVYCN FTAGGETCIF PDKKSNGVRI SSWPKEVPGS WFSEFKRGKI LSYVDAEGNS 1620 INMVQMTFLK LLTASARQNL TYSCHQSVAW HDATTDSYDR ALHFLGSNDE EISYDNNPYI 1680 KALSDGCAVR KGYGKTVLEI NTPKIDQVPI VDVKFTDFGD PNQKFGFEVG PVCFLG 1736 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | COL11A1 | 100685969 | J9NYK4 | Canis lupus familiaris | Prediction | More>> | ||
| 1:1 ortholog | COL11A1 | A0A452ECM1 | Capra hircus | Prediction | More>> | |||
| 1:1 ortholog | COL11A1 | 1301 | P12107 | Homo sapiens | Prediction | More>> | ||
| 1:1 ortholog | Col11a1 | 12814 | Q61245 | CPO | E14.5 | Mus musculus | Publication | More>> |
| 1:1 ortholog | COL11A1 | A0A2I3RPT1 | Pan troglodytes | Prediction | More>> | |||
| 1:1 ortholog | COL11A1 | 100349413 | G1T5B6 | Oryctolagus cuniculus | Prediction | More>> | ||
| 1:1 ortholog | Col11a1 | 25654 | P20909 | Rattus norvegicus | Prediction | More>> | ||
| 1:1 ortholog | col11a1a | 565402 | A2RUX5 | Danio rerio | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0062023 | collagen-containing extracellular matrix |
| GO:0005615 | extracellular space |
| GO:0005201 | extracellular matrix structural constituent |
| PROSITE ID | PROSITE Term |
|---|---|
| PS51461 | NC1_FIB |