Gene: LBR

Basic information

Tag Content
Uniprot ID A0A3Q2GWX9
Entrez ID 100056997
Genbank protein ID
Genbank nucleotide ID XM_005607983.2
Ensembl protein ID ENSECAP00000025001
Ensembl nucleotide ID ENSECAG00000011192
Gene name Lamin B receptor
Gene symbol LBR
Organism Equus caballus
NCBI taxa ID 9796
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MPSRKFADGE LVRGRWPGSS LYFEVEILSH DSSSQLYTVK YKDGTELELK ESDIKPLTSF 60
RQRKSGSTSS SPSRRRGSRS RSRSRSPGRL PKGSRRSASA SHQASVKEMR KEVLEVKLTP 120
LVLKPFGNSI SRYNGEPEHL ERNDIPLKST QEKFHLPQES SYVSTQYSLR PRREEIKLTE 180
IDSKEEKIVT KAPPLARTGE VTGTRTKDWE FGGAPGAFLI MLGLPPFLFL LLLMCQQREP 240
SLLNFPPPLP ALRDLWETRV FGVYLLWFLL QTLFHLLPVG KVVEGMPLAD GRRLKYRLNG 300
FCAFILTSAV VGASVFWGVE LYYVYRHFLQ FALAATVFSV ALSVYLSVRA RKAPREELSP 360
ASSGNAIYDF FIGRELNPRI GTFDLKYFCE LRPGLIGWVV VNLVMLLAEM KLQNRATPSL 420
AMILVNSFQL LYVVDALWNE EAVLTTMDII HDGFGFMLAF GDLVWVPFVY SLQAFYLVGH 480
PNEVSWPVAS LIIALKLCGY VIFRCANSQK NAFRKNPTDP KLAHLKTIHT STGKSLLVSG 540
WWGFVRHPNY LGDLVMALAW SLPCGFNHIL PYFYVIYFTL LLIHREARDE HQCRKKYGLA 600
WEKYCRRVPY RIFPHIY 617

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologLBR509348A6QQV8Bos taurusPredictionMore>>
1:1 orthologLBR490391E2QV27Canis lupus familiarisPredictionMore>>
1:1 orthologLBR100056997A0A3Q2GWX9Equus caballusPredictionMore>>
1:1 orthologLBR3930Q14739Homo sapiensPredictionMore>>
1:1 orthologLbr98386Q3U9G9CPOMus musculusPublicationMore>>
1:1 orthologLBR457776H2Q178Pan troglodytesPredictionMore>>
1:1 orthologLBRM3VH35Sus scrofaPredictionMore>>
1:1 orthologLBR100345014G1SCZ4Oryctolagus cuniculusPredictionMore>>
1:1 orthologA0A0G2JU83Rattus norvegicusPredictionMore>>
1:1 orthologlbrQ5RJ97Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005789 endoplasmic reticulum membrane
GO:0016021 integral component of membrane
GO:0031965 nuclear membrane
GO:0070087 chromo shadow domain binding
GO:0050613 delta14-sterol reductase activity
GO:0070402 NADPH binding
GO:0006695 cholesterol biosynthetic process
GO:0030223 neutrophil differentiation

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0472 Membrane
KW-1185 Reference proteome
KW-0812 Transmembrane
KW-1133 Transmembrane helix

Interpro

InterPro ID InterPro Term
IPR001171 Ergosterol_biosynth_ERG4_ERG24
IPR019023 Lamin-B_rcpt_of_tudor
IPR018083 Sterol_reductase_CS
IPR002999 Tudor

PROSITE

PROSITE ID PROSITE Term
PS01017 STEROL_REDUCT_1
PS01018 STEROL_REDUCT_2

Pfam

Pfam ID Pfam Term
PF01222 ERG4_ERG24
PF09465 LBR_tudor