Gene: LBR

Basic information

Tag Content
Uniprot ID H2Q178; A0A2J8K9H5;
Entrez ID 457776
Genbank protein ID JAA31897.1; JAA40962.1; JAA05540.1; JAA16649.1;
Genbank nucleotide ID XM_016939725.1; XM_514234.5;
Ensembl protein ID ENSPTRP00000003438
Ensembl nucleotide ID ENSPTRG00000002036
Gene name Lamin B receptor
Gene symbol LBR
Organism Pan troglodytes
NCBI taxa ID 9598
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MPSRKFADGE VVRGRWPGSS LYYEVEILSH DSTSQLYTVK YKDGTELELK ENDIKPLTSF 60
RQRKGGSTSS SPSRRRGSRS RSRSRSPGRP PKSARRSASA SHQADIKEAR REVEVKLTPL 120
ILKPFGNSIS RYNGEPEHIE RNDAPHKNTQ EKFNLSQESS YIATQYSLRP RKEEVKLKEI 180
DSKEEKYIAK ELAVRTFEVT PIRAKDLEFG GVPGVFLIMF GLPVFLFLLL LMCKQKDPSL 240
LNFPPPLPAL YELWETRVFG VYLLWFLIQV LFYLLPIGKV VEGTPLIDGR RLKYRLNGFY 300
AFILTSAVIG TSLFQGVEFH YVYSHFLQFA LAATVFCVVL SVYLYVRSLK APRNDLSPAS 360
SGNAVYDFFI GRELNPRIGT FDLKYFCELR PGLIGWVVVN LVMLLAEMKI QDRAVPSLAM 420
ILVNSFQLLY VVDALWNEEA LLTTMDIIHD GFGFMLAFGD LVWVPFIYSF QAFYLVSHPN 480
EVSWPMASLI IVLKLCGYVI FRGANSQKNA FRKNPSDPKL AHLKTIHTST GKNLLVSGWW 540
GFVRHPNYLG DLIMALAWSL PCGFNHILPY FYIIYFTMLL VHREARDEYH CKKKYGVAWE 600
KYRQRVPYRI FPYIY 615

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologLBR509348A6QQV8Bos taurusPredictionMore>>
1:1 orthologLBR490391E2QV27Canis lupus familiarisPredictionMore>>
1:1 orthologLBR100056997A0A3Q2GWX9Equus caballusPredictionMore>>
1:1 orthologLBR3930Q14739Homo sapiensPredictionMore>>
1:1 orthologLbr98386Q3U9G9CPOMus musculusPublicationMore>>
1:1 orthologLBR457776H2Q178Pan troglodytesPredictionMore>>
1:1 orthologLBRM3VH35Sus scrofaPredictionMore>>
1:1 orthologLBR100345014G1SCZ4Oryctolagus cuniculusPredictionMore>>
1:1 orthologA0A0G2JU83Rattus norvegicusPredictionMore>>
1:1 orthologlbrQ5RJ97Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005789 endoplasmic reticulum membrane
GO:0016021 integral component of membrane
GO:0005637 nuclear inner membrane
GO:0070087 chromo shadow domain binding
GO:0050613 delta14-sterol reductase activity
GO:0070402 NADPH binding
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors
GO:0006695 cholesterol biosynthetic process
GO:0030223 neutrophil differentiation
GO:0016126 sterol biosynthetic process

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0472 Membrane
KW-0675 Receptor
KW-1185 Reference proteome
KW-0812 Transmembrane
KW-1133 Transmembrane helix

Interpro

InterPro ID InterPro Term
IPR001171 Ergosterol_biosynth_ERG4_ERG24
IPR019023 Lamin-B_rcpt_of_tudor
IPR018083 Sterol_reductase_CS
IPR002999 Tudor

PROSITE

PROSITE ID PROSITE Term
PS01017 STEROL_REDUCT_1
PS01018 STEROL_REDUCT_2

Pfam

Pfam ID Pfam Term
PF01222 ERG4_ERG24
PF09465 LBR_tudor