| Tag | Content |
|---|---|
| Uniprot ID | A0A452FF40 |
| Entrez ID | 102169238 |
| Genbank protein ID | |
| Genbank nucleotide ID | XM_018039247.1 |
| Ensembl protein ID | ENSCHIP00000022795 |
| Ensembl nucleotide ID | ENSCHIG00000020633 |
| Gene name | TGc domain-containing protein |
| Gene symbol | F13A1 |
| Organism | Capra hircus |
| NCBI taxa ID | 9925 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | MSESSETAFG GRRAIPPNTS NAAENDPPTV ELQGLVPRGF NPQDYLNVMN VHLFKERWDS 60 NKVDHHTDKY SNNQLIVRRG QSFYIQIDFN RPYDPRRDFF RVEYVIGRYP QENKGTYVPV 120 PVVSELQSGK WGAKVVMKED RSVRLSVQSS PDCIVGKFRM YVAVWTPYGV IRTARNPATD 180 TYILFNPWCE EDAVYLDNEK EREEYVLNDI GVIFYGDFND IKSRSWSYGQ FEEGILDTCL 240 YVMDRANMDL SGRGNPIKVS RVGSAMINAK DDEGVIAGSW DNVYAYGVPP SAWTGSVDIL 300 LEYKSSQKPV RYGQCWVFAG VFNTFLRCLG IPARVVTNYF SAHDNDANLQ LDIFLEEDGN 360 VNSKLTKDSV WNYHCWNEAW MTRPDLPVGF GGWQVVDSTP QENSDGMYRC GPASVQAIKH 420 GHVCFQFDAP FVFAEVNSDL VYITAKKDGT HVVETLDTTH IGKLIVTKEI GGDGIKDITD 480 TYKFQEGQEE ERLALETALM YGAKKARNTE GVLKSRSDVH MNFEVENAVL GRDFKVIITF 540 RNNGSTRYTV AAYLSGNISF YTGVSKAEFK NETFNVTLEP LSFKREEVLI GAGEYMGQLL 600 EQAFLHFFVT ARVNETRDVL AKQKSIVLTV PKVIIKVRGA QVVGSDMVVM VEFTNPLKET 660 LRNVWIRLDG PGVTKPLRRM FREIRPNATV QWEELCRPWV SGPRKLIASL TSDSLRHVYG 720 ELDLQIQRRP SM 732 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | F13A1 | F1PKX3 | Canis lupus familiaris | Prediction | More>> | |||
| 1:1 ortholog | F13A1 | 102169238 | A0A452FF40 | Capra hircus | Prediction | More>> | ||
| 1:1 ortholog | F13A1 | 2162 | P00488 | CPO,CL/P | Homo sapiens | Publication | More>> | |
| 1:1 ortholog | F13a1 | 74145 | Q8BH61 | Mus musculus | Prediction | More>> | ||
| 1:1 ortholog | F13A1 | 462413 | H2QS92 | Pan troglodytes | Prediction | More>> | ||
| 1:1 ortholog | F13A1 | 100153504 | K7GQL2 | Sus scrofa | Prediction | More>> | ||
| 1:1 ortholog | F13a1 | 60327 | G3V811 | Rattus norvegicus | Prediction | More>> | ||
| 1:1 ortholog | f13a1b | F1R1R7 | Danio rerio | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0046872 | metal ion binding |
| GO:0003810 | protein-glutamine gamma-glutamyltransferase activity |
| GO:0072378 | blood coagulation, fibrin clot formation |
| GO:0018149 | peptide cross-linking |
| InterPro ID | InterPro Term |
|---|---|
| IPR034810 | Factor_XIII_A |
| IPR013783 | Ig-like_fold |
| IPR014756 | Ig_E-set |
| IPR038765 | Papain-like_cys_pep_sf |
| IPR002931 | Transglutaminase-like |
| IPR036985 | Transglutaminase-like_sf |
| IPR023608 | Transglutaminase_animal |
| IPR013808 | Transglutaminase_AS |
| IPR008958 | Transglutaminase_C |
| IPR036238 | Transglutaminase_C_sf |
| IPR001102 | Transglutaminase_N |
| PROSITE ID | PROSITE Term |
|---|---|
| PS00547 | TRANSGLUTAMINASES |