| Tag | Content |
|---|---|
| Uniprot ID | F1R1R7 |
| Entrez ID | |
| Genbank protein ID | |
| Genbank nucleotide ID | |
| Ensembl protein ID | ENSDARP00000093311; ENSDARP00000123898; ENSDARP00000153253; ENSDARP00000147730; |
| Ensembl nucleotide ID | ENSDARG00000036893 |
| Gene name | Coagulation factor XIII, A1 polypeptide b |
| Gene symbol | f13a1b |
| Organism | Danio rerio |
| NCBI taxa ID | 7955 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | MADQVAPENP TPAAAPTVRP KQRVSHRGRS AGGRASSNQQ EGKVEEFEPF MLMPRGPPPL 60 TEYLDIFDVD VLKQPNEVNK QAHHTHLYSS NFLIVRRAQE FQIKITFNRP YKPAEDKFAV 120 EFVIGPVPQY SKGTYIPVFP TAKRQSVWSG RVIESSENVV TMGITPSAEC IVGKYMTYIG 180 VETPYGIRRT RRDPNTDIYI LFNPWSPADP VFLDDEEERE ECVMNELGII YHGAYDDVSE 240 RAWNYGQFEF GVLDACLFVM DKADMPLSNR GDVVKVTRVA SAMLNSRDDD GVLVGNWSGD 300 YMYGVPPTSW TGSVEILLDY ANSSGTPVCY AQCWVYAAVF NTFLRCLGIP SRVVTNFFSA 360 HDNDGNLKMD IILDENGKLD RNRTKDSIWN YHCWNECYMA RPDLPSGFGG WQVVDATPQE 420 TSDGMFRCGP ASVAAIKHGQ ICYPFDAPFV FAEVNSDVVF YRRRKDGILE VVKVNQTHVG 480 RMVLTKAVLH SGRRDITNQY KFPEGSPEER RVLEKAEEFG CQREKSSPAL SDVDVEIHSL 540 DVNVGENFDV TLQFTNRSDQ RRTADVYITG TVVYYTGVPS GEVVFKTPKV KLEPMQSKEE 600 KVLVRSEDYM NKLVEQRNIH FIATGKIKET GQIITAMKVI AMHHPKLTVK VTGSPRVSEE 660 MYVSVEFTNP FKFSLENVDL RVEGPGVLPF KYKQYSVIAP GTSITWTEAF SPRRAGSTKV 720 FAKLDCAALR QVYGETELTV QE 742 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | F13A1 | F1PKX3 | Canis lupus familiaris | Prediction | More>> | |||
| 1:1 ortholog | F13A1 | 102169238 | A0A452FF40 | Capra hircus | Prediction | More>> | ||
| 1:1 ortholog | F13A1 | 2162 | P00488 | CPO,CL/P | Homo sapiens | Publication | More>> | |
| 1:1 ortholog | F13a1 | 74145 | Q8BH61 | Mus musculus | Prediction | More>> | ||
| 1:1 ortholog | F13A1 | 462413 | H2QS92 | Pan troglodytes | Prediction | More>> | ||
| 1:1 ortholog | F13A1 | 100153504 | K7GQL2 | Sus scrofa | Prediction | More>> | ||
| 1:1 ortholog | F13a1 | 60327 | G3V811 | Rattus norvegicus | Prediction | More>> | ||
| 1:1 ortholog | f13a1b | F1R1R7 | Danio rerio | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0046872 | metal ion binding |
| GO:0003810 | protein-glutamine gamma-glutamyltransferase activity |
| GO:0072378 | blood coagulation, fibrin clot formation |
| GO:0018149 | peptide cross-linking |
| InterPro ID | InterPro Term |
|---|---|
| IPR034810 | Factor_XIII_A |
| IPR013783 | Ig-like_fold |
| IPR014756 | Ig_E-set |
| IPR038765 | Papain-like_cys_pep_sf |
| IPR002931 | Transglutaminase-like |
| IPR036985 | Transglutaminase-like_sf |
| IPR023608 | Transglutaminase_animal |
| IPR008958 | Transglutaminase_C |
| IPR036238 | Transglutaminase_C_sf |
| IPR001102 | Transglutaminase_N |