| Tag | Content |
|---|---|
| Uniprot ID | G3V811 |
| Entrez ID | 60327 |
| Genbank protein ID | EDL98278.1; EDL98279.1; |
| Genbank nucleotide ID | NM_021698.2 |
| Ensembl protein ID | ENSRNOP00000021568 |
| Ensembl nucleotide ID | ENSRNOG00000015957 |
| Gene name | Coagulation factor XIII A chain |
| Gene symbol | F13a1 |
| Organism | Rattus norvegicus |
| NCBI taxa ID | 10116 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | MSDTPATTFG GRRAIPPNNS NAAEVDLPTE DLQGLVPRGV SLKDYLNVTA VHLFKERWDS 60 NKIDHHTDKY DNNKLIVRRG QTFYIQIDFN RPYDPRKDLF RVEYVIGRYP QENKGTYIPV 120 PVVTELQSGK WGAKVIMNED RSVRLSVQSS PECIVGKFRM YVAVWTPYGI LRTQRDPETD 180 TYILFNPWCE EDAVYLDDEK EREEYVLNDI GVIFHGDFND IKSRSWSYGQ FEDGILDACL 240 YVMDKAEMDL SGRGNPIKVS RVGSAMVNAK DDEGVLVGSW DNVYAYGIPP SAWTGSVDIL 300 LEYRSSETPV RYGQCWVFAG VFNTFLRCLG IPARVITNYF SAHDNDANLQ MDIFLEEDGS 360 VSSKLTKDSV WNYHCWNEAW MTRPDLPVGF GGWQAVDSTP QENSDGMYRC GPASVQAVKH 420 GHVCFQFDAP FVFAEVNSDL VYITAKKDGT HVVENVDATH IGKLIVTKEI GGDGMQDITD 480 TYKFQEGQEE ERLALETALM YGAKKTLNTE GVVKSRSDVD MNFDVENAVL GKDFRVTITF 540 QNNSSNLYTI LAYLSGNITF YTGVSKKEFK TESFEVTLDP LSLEKKEVLI RAGEYMSYLL 600 EQGLLHFFVT ARINETRVVL AKQKSIVLTI PKVTIKVRGT AMVGSDMVVT VEFTNPLKET 660 LKNVWLHLEG PGVMRPKRKM FREIRPNATV QWEEVCQPWV SGHRKLIASM TSDSLRHVYG 720 ELDLQIRRRP TV 732 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | F13A1 | F1PKX3 | Canis lupus familiaris | Prediction | More>> | |||
| 1:1 ortholog | F13A1 | 102169238 | A0A452FF40 | Capra hircus | Prediction | More>> | ||
| 1:1 ortholog | F13A1 | 2162 | P00488 | CPO,CL/P | Homo sapiens | Publication | More>> | |
| 1:1 ortholog | F13a1 | 74145 | Q8BH61 | Mus musculus | Prediction | More>> | ||
| 1:1 ortholog | F13A1 | 462413 | H2QS92 | Pan troglodytes | Prediction | More>> | ||
| 1:1 ortholog | F13A1 | 100153504 | K7GQL2 | Sus scrofa | Prediction | More>> | ||
| 1:1 ortholog | F13a1 | 60327 | G3V811 | Rattus norvegicus | Prediction | More>> | ||
| 1:1 ortholog | f13a1b | F1R1R7 | Danio rerio | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0046872 | metal ion binding |
| GO:0003810 | protein-glutamine gamma-glutamyltransferase activity |
| GO:0072378 | blood coagulation, fibrin clot formation |
| GO:0018149 | peptide cross-linking |
| InterPro ID | InterPro Term |
|---|---|
| IPR034810 | Factor_XIII_A |
| IPR013783 | Ig-like_fold |
| IPR014756 | Ig_E-set |
| IPR038765 | Papain-like_cys_pep_sf |
| IPR002931 | Transglutaminase-like |
| IPR036985 | Transglutaminase-like_sf |
| IPR023608 | Transglutaminase_animal |
| IPR013808 | Transglutaminase_AS |
| IPR008958 | Transglutaminase_C |
| IPR036238 | Transglutaminase_C_sf |
| IPR001102 | Transglutaminase_N |
| PROSITE ID | PROSITE Term |
|---|---|
| PS00547 | TRANSGLUTAMINASES |