| Tag | Content |
|---|---|
| Uniprot ID | A0A480JVC3 |
| Entrez ID | |
| Genbank protein ID | HDA53273.1 |
| Genbank nucleotide ID | |
| Ensembl protein ID | |
| Ensembl nucleotide ID | |
| Gene name | Receptor-type tyrosine-protein phosphatase F isoform X14 |
| Gene symbol | |
| Organism | Sus scrofa |
| NCBI taxa ID | 9823 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | MAPKPAPGRT MMPLVPALVV LGLVAGAHGD SKPVFIKVPE DQTGLSGGVA SFVCQATGEP 60 KPRITWMKKG KKVSSQRFEV IEFDDGAGSV LRIQPLRVQR DEAIYECTAT NSLGEINTSA 120 KLSVLEEEQL PPGFPSIDMG PQLKVVEKAR TATMLCAAGG NPDPEISWFK DFLPVDPATS 180 NGRIKQLRSG ALQIESSEES DQGKYECVAT NSAGTRYSAP ANLYVRVRRV APRFSIPPSS 240 QEVMPGGSVN LTCVAVGAPM PYVKWMVGAE ELTKEDEMPV GRNVLELSNV VRSANYTCVA 300 ISSLGMIEAT AQVTVKALPK PPIDLVVTET TATSVTLTWD SGNSEPVSYY GIQYRPAGTE 360 GPFQEVDGVA TTRYSIGGLS PFSEYAFRVL AVNSIGRGPP SEAVRARTGE QAPSSPPRRV 420 QARMLSASTM LVQWEPPEEP NGLVRGYRVY YTPDSRRPLS AWHKHNTDAG LLTTVGSLLP 480 GITYSLRVLA FTAVGDGPPS PTIQVKTQQG VPAQPADFQA EADSDTRIRL SWLLPPQERV 540 IKYELVYWAA EDEGQQHKVT FDPTSSYTLE DLKPDTLYRF QLAARSEMGV GVFTPTVEAR 600 TAQSTPSAPP QKVTCVSVGS TTVRVSWVPP PADSRNGVIT QYSVAYEAVD GEDRERHVVG 660 GIGREHSSWD LVGLEKWTEY RVWVRAHTDV GPGPESSPVL VRTDEDVPSG PPRKVEVDPL 720 NSTAVRVSWK LPVPSKQHGQ IRGYQVTYVR LENGEPRGPP VIQDVMLAEA QETTISGLTP 780 ETTYSITVAA YTTKGDGARS KPKIVTTTGA VFAKNFRVAA AMKTSVLLSW EVPDSYKSAV 840 PFRILYNGQS VEVDGHSMQK LIANLQPNTE YSFVLMNRGS SAGGLQHLVS IRTAPDLLPH 900 KPLPASAFIE DGRFTLSMPH VQDPSLIRWF YIMVVPIDRV GGSMLAPRWS TPEELELDEL 960 LEAIEQGGGE RRRRRRRQTE RLKPYVAAQV DVLPETFTLG DKKSYRGFYN RPLSPDLSYQ 1020 CFVLASLKEP VDQKRYAASP YSDEIVVQVT PAQQQEEPEM LWVTGPVLAV ILIILIVIAI 1080 LLFKRKRTQS PSSKDEQSIG LKDSLLAHSS DPVEMRRLNY QTPGMRDHPP IPVTDLADNI 1140 ERLKANDGLK FSQEYESIDP GQQFTWENSN LEVNKPKNRY ANVIAYDHSR VILTSIDGVP 1200 GSDYINANYI DGYRKQNAYI ATQGPLPETM GDFWRMVWEQ RTATVVMMTR LEEKSRVKCD 1260 QYWPARGTET YGLVQVTLLD TVELATYTVR TFALHKSGSS EKRELRQFQF MAWPDHGVPE 1320 YPTPILAFLR RVKACNPLDA GPMVVHCSAG VGRTGCFIVI DAMLERMKHE KTVDIYGHVT 1380 CMRAQRNYMV QTEDQYVFIH EALLEAATCG HTEVPARSLY AHIQKLGQVP PGESVTAMEL 1440 EFKLLASSKA HTSRFISANL PCNKFKNRLV NIMPYELTRV CLQPIRGVEG SDYINASFLD 1500 GYRQQKAYIA TQGPLAESTE DFWRMLWEHN STIVVMLTRL REMGREKCHQ YWPAERSARY 1560 QYFVVDPMAE YNMPQYILRE FKVTDARDGQ SRTIRQFQFT DWPEQGVPKT GEGFIDFIGQ 1620 VHKTKEQFGQ DGPITVHCSA GVGRTGVFIT LSIVLERMRY EGVVDMFQTV KTLRTQRPAM 1680 VQTEDQYQLC YRAALEYLGS FDHYAT 1706 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | PTPRF | 512072 | A7MBJ4 | Bos taurus | Prediction | More>> | ||
| 1:1 ortholog | PTPRF | A0A452EN77 | Capra hircus | Prediction | More>> | |||
| 1:1 ortholog | PTPRF | 5792 | P10586 | Homo sapiens | Prediction | More>> | ||
| 1:1 ortholog | Ptprf | 19268 | A2A8L5 | CPO | Mus musculus | Publication | More>> | |
| 1:1 ortholog | PTPRF | 456828 | K7D8P0 | Pan troglodytes | Prediction | More>> | ||
| 1:1 ortholog | A0A480JVC3 | Sus scrofa | Prediction | More>> | ||||
| 1:1 ortholog | Ptprf | A0A0G2JT62 | Rattus norvegicus | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0016021 | integral component of membrane |
| GO:0004725 | protein tyrosine phosphatase activity |
| InterPro ID | InterPro Term |
|---|---|
| IPR003961 | FN3_dom |
| IPR036116 | FN3_sf |
| IPR007110 | Ig-like_dom |
| IPR036179 | Ig-like_dom_sf |
| IPR013783 | Ig-like_fold |
| IPR013098 | Ig_I-set |
| IPR003599 | Ig_sub |
| IPR003598 | Ig_sub2 |
| IPR029021 | Prot-tyrosine_phosphatase-like |
| IPR000242 | PTPase_domain |
| IPR016130 | Tyr_Pase_AS |
| IPR003595 | Tyr_Pase_cat |
| IPR000387 | TYR_PHOSPHATASE_dom |