Gene: NECTIN2

Basic information

Tag Content
Uniprot ID A2TEQ2
Entrez ID 100038012
Genbank protein ID HDA53799.1; HDA58956.1; HDB05545.1; ABM92331.1;
Genbank nucleotide ID NM_001097494.1
Ensembl protein ID ENSSSCP00000003346
Ensembl nucleotide ID ENSSSCG00000003090
Gene name Nectin-2 isoform alpha
Gene symbol NECTIN2
Organism Sus scrofa
NCBI taxa ID 9823
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MARAAALPPS RLSPPTLPLL PLLLLLLRET RAQDVRVRVA AEVRGHLGDT VELPCHLLPP 60
APEVRVSQVT WLRLDTPEDN QNVAIFHPQY GPSFPRAKPG KERLSFVKPG QSTGSGPGTE 120
VEVRDATLAL RGLTVEDEGN YTCEFATFPQ GTSRGVTWLR VIAEPQNHAE TQEVTLSLEP 180
VPVARCVSAG GRPPARVSWL SPLDGETRES QVSGPVPGTV TVTSRFTLVP LGRADGVKIT 240
CRVEHESFKE PVLLPVTLSV RYPPEVSISG YDDNWYIGRS EATLNCDVRS KPEPTGYDWS 300
TTSGVFPASA VAQGPKLIVH SVDKLFNTTF ICTVTNAVGT GHAEQVVLVR DTPRASPQDV 360
GPVVWGAVGG TLLVLLLLAG GSLAFILLRV RRRRKSPGGG ADGGRGGTYD DPKTQVFGNG 420
GPVFWTPTAA GPLRPEGKEE EDEEDEEEKG LMLPSPPAIE DDMESQLDGS LISRRAVYV 479

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologNECTIN2505580Q17QC7Bos taurusPredictionMore>>
1:1 orthologNECTIN2611060F1PWL4Canis lupus familiarisPredictionMore>>
1:1 orthologNECTIN2A0A452G7Y9Capra hircusPredictionMore>>
1:1 orthologNECTIN2100065463F6YWH3Equus caballusPredictionMore>>
1:1 orthologNECTIN25819Q92692Homo sapiensPublicationMore>>
1:1 orthologNectin219294P32507Mus musculusPredictionMore>>
1:1 orthologNECTIN2456118K6ZRP3Pan troglodytesPredictionMore>>
1:1 orthologNECTIN2100038012A2TEQ2Sus scrofaPredictionMore>>
1:1 orthologNectin2308417A0A0G2KA71Rattus norvegicusPredictionMore>>

Gene ontology

GO ID GO Term
GO:0016021 integral component of membrane

Functional annotations

Keywords

Keyword ID Keyword Term
KW-1015 Disulfide bond
KW-0393 Immunoglobulin domain
KW-0472 Membrane
KW-1267 Proteomics identification
KW-0675 Receptor
KW-1185 Reference proteome
KW-0732 Signal
KW-0812 Transmembrane
KW-1133 Transmembrane helix

Interpro

InterPro ID InterPro Term
IPR013162 CD80_C2-set
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR003599 Ig_sub
IPR013106 Ig_V-set

PROSITE

PROSITE ID PROSITE Term
PS50835 IG_LIKE

Pfam

Pfam ID Pfam Term
PF08205 C2-set_2
PF07686 V-set