| Tag | Content |
|---|---|
| Uniprot ID | F1PFZ2 |
| Entrez ID | 100684854 |
| Genbank protein ID | |
| Genbank nucleotide ID | XM_003432210.3 |
| Ensembl protein ID | ENSCAFP00000005032 |
| Ensembl nucleotide ID | ENSCAFG00000003390 |
| Gene name | TATA-box binding protein associated factor, RNA polymerase I subunit B |
| Gene symbol | TAF1B |
| Organism | Canis lupus familiaris |
| NCBI taxa ID | 9615 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | MDLEEAKEFK ERCTQCAAVS WGLTDEGKYY CTSCHNVTER SKEVINTGDI PNTKIQAINR 60 GLKRKRKFEK GWDWYVCEGF QQILYQQAEA LKTLGVGPEL KNEVLHNFWK RYLQKSKQAY 120 CKNPVYTSKR KATVLEDNPS HSDWDSEPDL LSDFSCPSFV ESGTDSKPDG HTQKPFPISR 180 TSQSETASIC SGSLDGVTYS LQKEKGIVKM TVPRTLAFCY LSLLWQRETI TLSDLLRFVE 240 EGHIPYIHAF QRFPEEMKLY GRDKGIFAIE SWPTYEDIYK KTIEIGKFLD LPRFPDITED 300 CYLHPNILCM KYLMEVNLPD EMNDLTCQVV KMTGIGEVDF LTFDPIAKMA KTVKYDVQAV 360 AVIVVVLKLL FLLDDNLEWT LSNIAEKYNE KNKEDKPWFD FRKWYQVMKR SIDEKKQKWE 420 EARAKYLWKS EKPLYHSSID KAVVYKRREM VVNLQKQFST LVDSVPTVEK KRPSSFQFNW 480 TEGDSTRTCF HGHGLQGILK KKGQSLTTKN SLYWLSTQKF CRSYCKHVTT YEESNFSRSY 540 QFIINLFSFL LRIKTSSLHE EVSLIEKRLF KAKYSKTKKK SRSRKGRK 588 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | TAF1B | 511236 | Q1JQD6 | Bos taurus | Prediction | More>> | ||
| 1:1 ortholog | TAF1B | 100684854 | F1PFZ2 | Canis lupus familiaris | Prediction | More>> | ||
| 1:1 ortholog | TAF1B | 102186603 | A0A452EIN8 | Capra hircus | Prediction | More>> | ||
| 1:1 ortholog | TAF1B | 9014 | Q53T94 | Homo sapiens | Publication | More>> | ||
| 1:1 ortholog | Taf1b | 21340 | P97358 | Mus musculus | Prediction | More>> | ||
| 1:1 ortholog | TAF1B | 459022 | H2QHF2 | Pan troglodytes | Prediction | More>> | ||
| 1:1 ortholog | TAF1B | F1SA99 | Sus scrofa | Prediction | More>> | |||
| 1:1 ortholog | Taf1b | 690450 | D3ZYB7 | Rattus norvegicus | Prediction | More>> | ||
| 1:1 ortholog | taf1b | F1R3W0 | Danio rerio | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0005654 | nucleoplasm |
| GO:0070860 | RNA polymerase I core factor complex |
| GO:0005668 | RNA polymerase transcription factor SL1 complex |
| GO:0001164 | RNA polymerase I core promoter sequence-specific DNA binding |
| GO:0042790 | nucleolar large rRNA transcription by RNA polymerase I |
| Keyword ID | Keyword Term |
|---|---|
| KW-1185 | Reference proteome |
| Pfam ID | Pfam Term |
|---|---|
| PF11781 | zf-RRN7 |