Gene: TAF1B

Basic information

Tag Content
Uniprot ID H2QHF2; A0A2J8NM06;
Entrez ID 459022
Genbank protein ID JAA25406.1; JAA11843.1; JAA41195.1; JAA04818.1;
Genbank nucleotide ID XM_009441987.2
Ensembl protein ID ENSPTRP00000020020
Ensembl nucleotide ID ENSPTRG00000011642
Gene name TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa
Gene symbol TAF1B
Organism Pan troglodytes
NCBI taxa ID 9598
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MDLEEAEEFK ERCAQCAAVS WGLTDEGKYY CTSCHNVTER YQEVTNTDLI PNTQIKALNR 60
GLKKKNNTEK GWDWYVCEGF QYILYQQAEA LKNLGVGPEL KNNVLHNFWK RYLQKSKQAY 120
CKNPVYTTGR KPTVLEDNLS HSDWASEPEL LSDVSCPPFL ESGAESQSDI HTRKPFPVSK 180
ASQSETSVCS GSLDGVEYSQ RKEKGIVKMT VPQTLAFCYL SLLWQREAIT LSDLLRFVEE 240
DHIPYINAFQ HFPEQMKLYG RDRGIFGIES WPDYEDIYKK TIEVGTFLDL PRFPDITKDC 300
YLHPNILCMK YLMEVNLPDE MHSLTCHVVK MTGMGEVDFL TFDPIAKMAK TVKYDVQAVA 360
IIVVVLKLLF LLDDSFEWSL SNLAEKHNEK NKKDKPWFDF RKWYQIMKKA FDEKKQKWEE 420
ARAKYLWKSE KPLYYSFVDK PVAYKKREMV VNLQKQFSTL VESTATAGKK SPSSFQFNWT 480
EEDTDRTCFH GHSLQGVLKE KGQSLLTKNS LYWLSTQKFC RCYCTHVTTY EESNYSLSYQ 540
FILNLFSFLL RIKTSLLHEE VSLVEKKLFE KKYSVKRKKS RSKKVRRH 588

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologTAF1B511236Q1JQD6Bos taurusPredictionMore>>
1:1 orthologTAF1B100684854F1PFZ2Canis lupus familiarisPredictionMore>>
1:1 orthologTAF1B102186603A0A452EIN8Capra hircusPredictionMore>>
1:1 orthologTAF1B9014Q53T94Homo sapiensPublicationMore>>
1:1 orthologTaf1b21340P97358Mus musculusPredictionMore>>
1:1 orthologTAF1B459022H2QHF2Pan troglodytesPredictionMore>>
1:1 orthologTAF1BF1SA99Sus scrofaPredictionMore>>
1:1 orthologTaf1b690450D3ZYB7Rattus norvegicusPredictionMore>>
1:1 orthologtaf1bF1R3W0Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005654 nucleoplasm
GO:0070860 RNA polymerase I core factor complex
GO:0005668 RNA polymerase transcription factor SL1 complex
GO:0001164 RNA polymerase I core promoter sequence-specific DNA binding
GO:0042790 nucleolar large rRNA transcription by RNA polymerase I

Functional annotations

Keywords

Keyword ID Keyword Term
KW-1185 Reference proteome

Interpro

InterPro ID InterPro Term
IPR033599 TAF1B/Rrn7
IPR021752 TF_Rrn7_Zf

PROSITE

PROSITE ID PROSITE Term

Pfam

Pfam ID Pfam Term
PF11781 zf-RRN7