| Tag | Content |
|---|---|
| Uniprot ID | F1SA99 |
| Entrez ID | |
| Genbank protein ID | HDB73301.1 |
| Genbank nucleotide ID | XM_013996346.1 |
| Ensembl protein ID | ENSSSCP00000009206 |
| Ensembl nucleotide ID | ENSSSCG00000008637 |
| Gene name | TATA box-binding protein-associated factor RNA polymerase I subunit B isoform a |
| Gene symbol | TAF1B |
| Organism | Sus scrofa |
| NCBI taxa ID | 9823 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | MDLEEAKEFK ERCTQCAAVS WGLTDEGKYY CTSCHNVTER SKEVINTGAI PNTKIQAINR 60 GLKRKRKLEK GWDWYVCEGF QHILCQQAEA LQTLGVGPEL KDEVLHNFWK RYLQKSKQAY 120 CKNPVHTSRR KTTVLEDNPS HSDWDSEPEL LSDFSCPSFV ESGAESQPDV HTQKPFRIIK 180 ASHSETSVCS GSLDGVEYSL RKDKDIVKMT VPRTLAFCYL SLLWQRETVT LSDLLRFAEE 240 DCIPYINAFQ HFPEEMKLYG RDKGIFAIES WPTYEDIYKK VIEVATFLDL PRFPAITEDC 300 YLHPNILCMK FLMEVNLPVE MHDVTCQVVK VTGIGEVDFL TFDPIAKKGK AVKYDVQAVA 360 VVIAALKLLF LLDDSLEWSL SNIAEKHNEG NKEDKPWFDF RKWYQVMKKA IDEKKQKWEE 420 ARAKYLWKSE RPLYHSAIDK PVVYKRREMV VSLQKQFSTL IDSTPSVEKR SPSSFQFNWT 480 AEDSDRTCFH EHSLQGVLKQ KGQSLTTKNS LYWLSTQKFC RSYCKHVTTY EESNFSQSYQ 540 FILNLFSFLL RIKTSLLHEE VSLIEKRLFK TKYTKTTKKS SRSRKARKS 589 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | TAF1B | 511236 | Q1JQD6 | Bos taurus | Prediction | More>> | ||
| 1:1 ortholog | TAF1B | 100684854 | F1PFZ2 | Canis lupus familiaris | Prediction | More>> | ||
| 1:1 ortholog | TAF1B | 102186603 | A0A452EIN8 | Capra hircus | Prediction | More>> | ||
| 1:1 ortholog | TAF1B | 9014 | Q53T94 | Homo sapiens | Publication | More>> | ||
| 1:1 ortholog | Taf1b | 21340 | P97358 | Mus musculus | Prediction | More>> | ||
| 1:1 ortholog | TAF1B | 459022 | H2QHF2 | Pan troglodytes | Prediction | More>> | ||
| 1:1 ortholog | TAF1B | F1SA99 | Sus scrofa | Prediction | More>> | |||
| 1:1 ortholog | Taf1b | 690450 | D3ZYB7 | Rattus norvegicus | Prediction | More>> | ||
| 1:1 ortholog | taf1b | F1R3W0 | Danio rerio | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0005654 | nucleoplasm |
| GO:0070860 | RNA polymerase I core factor complex |
| GO:0005668 | RNA polymerase transcription factor SL1 complex |
| GO:0001164 | RNA polymerase I core promoter sequence-specific DNA binding |
| GO:0042790 | nucleolar large rRNA transcription by RNA polymerase I |
| Keyword ID | Keyword Term |
|---|---|
| KW-1185 | Reference proteome |
| Pfam ID | Pfam Term |
|---|---|
| PF11781 | zf-RRN7 |