| Tag | Content |
|---|---|
| Uniprot ID | G1SEP0 |
| Entrez ID | 100358087 |
| Genbank protein ID | |
| Genbank nucleotide ID | XM_002711706.3 |
| Ensembl protein ID | ENSOCUP00000000928 |
| Ensembl nucleotide ID | ENSOCUG00000001072 |
| Gene name | Beta-carotene oxygenase 1 |
| Gene symbol | BCO1 |
| Organism | Oryctolagus cuniculus |
| NCBI taxa ID | 9986 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | MDVLFGRNKK EQLEPVKAKV RGQIPPWLQG TLLRNGPGMH TIGESKYNHW FDGLALLHSF 60 AIRDGEVSYR SKYLRSDTYN ANIEANRIVV SEFGTMAYPD PCKNIFSKAF SYLSHTIPDF 120 TDNCLINIMK CGEDFYATSE TNYIRKINPE TLETLEKVDY RKYVAVNMAT AHPHYDAAGN 180 VFNMGTSIVD KGKTKYVMFR IPAEVPEAKG KGKRSPLTQA EAFCSVPSRS LLSPSYYHSF 240 GITENYLVFL EQPFKLDILK MATAYIRGVS WASCMAFHPE DKTYIHVIDQ RTRKPMPVRF 300 YTDPLVVFHH VNAYEEDGCI VFDVIAYDDS SLYQLFYLAN LNQAFEQNAR LTSAPTLRRF 360 ALPLRGDQNA EVGSNLIKLT STTARALKEK DDQVYCQPEF LYEGLELPRI NYSYNGKPYR 420 YVFAAEVQWS PIPTKILKYD ILTKSSLKWE EEGCWPAEPL FVPAPGAQDE DDGVILSAIV 480 STDAQKPPFL LILDAKSFTE LARASVDVEM HLDLHGVFIP DKDWVAQKQV PSQGPQEGAP 540 RA 542 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | BCO1 | 102179507 | A0A452FQT3 | Capra hircus | Prediction | More>> | ||
| 1:1 ortholog | BCO1 | 53630 | Q9HAY6 | Homo sapiens | Prediction | More>> | ||
| 1:1 ortholog | Bco1 | 63857 | Q9JJS6 | CPO | Mus musculus | Publication | More>> | |
| 1:1 ortholog | BCO1 | 468043 | H2QBK9 | Pan troglodytes | Prediction | More>> | ||
| 1:1 ortholog | BCO1 | A0A287BCU5 | Sus scrofa | Prediction | More>> | |||
| 1:1 ortholog | BCO1 | 100358087 | G1SEP0 | Oryctolagus cuniculus | Prediction | More>> | ||
| 1:1 ortholog | Bco1 | 114106 | G3V7N1 | Rattus norvegicus | Prediction | More>> | ||
| 1:1 ortholog | bco1 | 84039 | Q7ZTS0 | Danio rerio | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0046872 | metal ion binding |
| GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen |
| InterPro ID | InterPro Term |
|---|---|
| IPR004294 | Carotenoid_Oase |
| Pfam ID | Pfam Term |
|---|---|
| PF03055 | RPE65 |