Gene: Foxp2

Basic information

Tag Content
Uniprot ID P0CF24
Entrez ID 500037
Genbank protein ID
Genbank nucleotide ID NM_001271104.1
Ensembl protein ID ENSRNOP00000069190
Ensembl nucleotide ID ENSRNOG00000054508
Gene name Forkhead box protein P2
Gene symbol Foxp2
Organism Rattus norvegicus
NCBI taxa ID 10116
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description Transcriptional repressor that may play a role in the specification and differentiation of lung epithelium. May also play a role in developing neural, gastrointestinal and cardiovascular tissues. Can act with CTBP1 to synergistically repress transcription but CTPBP1 is not essential (By similarity). Plays a role in synapse formation by regulating SRPX2 levels.
Sequence
MMQESATETI SNSSMNQNGM STLSSQLDAG SRDGRSSGDT SSEVSTVELL HLQQQQALQA 60
ARQLLLQQQT SGLKSPKSSD KQRPLQVPVS VAMMTPQVIT PQQMQQILQQ QVLSPQQLQA 120
LLQQQQAVML QQQQLQEFYK KQQEQLHLQL LQQQQQQQQQ QQQQQQQQQQ QQQQQQQQQQ 180
QQQQQQQHPG KQAKEQQQQQ QQQQLAAQQL VFQQQLLQMQ QLQQQQHLLS LQCQGLISIP 240
PGQAALPVQS LPQAGLSPAE IQQLWKEVTG VHSQEDNGIK HGGLDLTTNN SSSTTSSTTS 300
KASPPITHHS IVNGQSSVLN ARRDSSSHEE TGASHTLYGH GVCKWPGCES ICEDFGQFLK 360
HLNNEHALDD RSTAQCRVQM QVVQQLEIQL SKERERLQAM MTHLHMRPSE PKPSPKPLNL 420
VSSVTMSKNM LETSPQSLPQ TPTTPTAPVT PITQGPSVIT PASVPNVGAI RRRHSDKYNI 480
PMSSEIAPNY EFYKNADVRP PFTYATLIRQ AIMESSDRQL TLNEIYSWFT RTFAYFRRNA 540
ATWKNAVRHN LSLHKCFVRV ENVKGAVWTV DEVEYQKRRS QKITGSPTLV KNIPTSLGYG 600
AALNASLQAA LAESSLPLLS NPGLINNASS GLLQAVHEDL NGSLDHIDSN GNSSPGCSPQ 660
PHIHSIHVKE EPVIAEDEDC PMSLVTTANH SPELEDDREI EEEPLSEDLE

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologFOXP2A0A452FUL3Capra hircusPredictionMore>>
1:1 orthologFOXP293986O15409Homo sapiensPublicationMore>>
1:1 orthologFoxp2114142P58463E14.5Mus musculusPredictionMore>>
1:1 orthologFOXP2449627Q8MJA0Pan troglodytesPredictionMore>>
1:1 orthologFOXP2A0A5G2QN29Sus scrofaPredictionMore>>
1:1 orthologFoxp2500037P0CF24Rattus norvegicusPredictionMore>>
1:1 orthologfoxp2H0WFE7Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005634 nucleus
GO:0050681 androgen receptor binding
GO:0003677 DNA binding
GO:0003700 DNA-binding transcription factor activity
GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0042802 identical protein binding
GO:0046872 metal ion binding
GO:0046982 protein heterodimerization activity
GO:0042803 protein homodimerization activity
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0043565 sequence-specific DNA binding
GO:0043010 camera-type eye development
GO:0021757 caudate nucleus development
GO:0021549 cerebellum development
GO:0021987 cerebral cortex development
GO:0030900 forebrain development
GO:0098582 innate vocalization behavior
GO:0048286 lung alveolus development
GO:0030324 lung development
GO:0000122 negative regulation of transcription by RNA polymerase II
GO:0045892 negative regulation of transcription, DNA-templated
GO:0050679 positive regulation of epithelial cell proliferation
GO:0060501 positive regulation of epithelial cell proliferation involved in lung morphogenesis
GO:0002053 positive regulation of mesenchymal cell proliferation
GO:0009791 post-embryonic development
GO:0021758 putamen development
GO:0033574 response to testosterone
GO:0060013 righting reflex
GO:0007519 skeletal muscle tissue development
GO:0048745 smooth muscle tissue development
GO:0042297 vocal learning

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0175 Coiled coil
KW-0238 DNA-binding
KW-0479 Metal-binding
KW-0539 Nucleus
KW-1185 Reference proteome
KW-0678 Repressor
KW-0804 Transcription
KW-0805 Transcription regulation
KW-0862 Zinc
KW-0863 Zinc-finger

Interpro

InterPro ID InterPro Term
IPR001766 Fork_head_dom
IPR032354 FOXP-CC
IPR030456 TF_fork_head_CS_2
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf

PROSITE

PROSITE ID PROSITE Term
PS00658 FORK_HEAD_2
PS50039 FORK_HEAD_3
PS00028 ZINC_FINGER_C2H2_1

Pfam

Pfam ID Pfam Term
PF00250 Forkhead
PF16159 FOXP-CC