Gene: Foxp2

Basic information

Tag Content
Uniprot ID P58463; Q6PD37; Q8C4F0; Q8R441;
Entrez ID 114142
Genbank protein ID AAK69651.1; AAH62926.1; AAL85482.1; BAC38477.1; AAH58960.1;
Genbank nucleotide ID NM_053242.4; NM_001286607.1; NM_212435.1;
Ensembl protein ID ENSMUSP00000031545; ENSMUSP00000111137; ENSMUSP00000111132;
Ensembl nucleotide ID ENSMUSG00000029563
Gene name Forkhead box protein P2
Gene symbol Foxp2
Organism Mus musculus
NCBI taxa ID 10090
Cleft type
Developmental stage E14.5
Data sources Homology search
Reference
Functional description Transcriptional repressor that may play a role in the specification and differentiation of lung epithelium. May also play a role in developing neural, gastrointestinal and cardiovascular tissues. Can act with CTBP1 to synergistically repress transcription but CTPBP1 is not essential. Plays a role in synapse formation by regulating SRPX2 levels.
Sequence
MMQESATETI SNSSMNQNGM STLSSQLDAG SRDGRSSGDT SSEVSTVELL HLQQQQALQA 60
ARQLLLQQQT SGLKSPKSSE KQRPLQVPVS VAMMTPQVIT PQQMQQILQQ QVLSPQQLQA 120
LLQQQQAVML QQQQLQEFYK KQQEQLHLQL LQQQQQQQQQ QQQQQQQQQQ QQQQQQQQQQ 180
QQQQQQQQQQ QHPGKQAKEQ QQQQQQQQLA AQQLVFQQQL LQMQQLQQQQ HLLSLQRQGL 240
ISIPPGQAAL PVQSLPQAGL SPAEIQQLWK EVTGVHSMED NGIKHGGLDL TTNNSSSTTS 300
STTSKASPPI THHSIVNGQS SVLNARRDSS SHEETGASHT LYGHGVCKWP GCESICEDFG 360
QFLKHLNNEH ALDDRSTAQC RVQMQVVQQL EIQLSKERER LQAMMTHLHM RPSEPKPSPK 420
PLNLVSSVTM SKNMLETSPQ SLPQTPTTPT APVTPITQGP SVITPASVPN VGAIRRRHSD 480
KYNIPMSSEI APNYEFYKNA DVRPPFTYAT LIRQAIMESS DRQLTLNEIY SWFTRTFAYF 540
RRNAATWKNA VRHNLSLHKC FVRVENVKGA VWTVDEVEYQ KRRSQKITGS PTLVKNIPTS 600
LGYGAALNAS LQAALAESSL PLLSNPGLIN NASSGLLQAV HEDLNGSLDH IDSNGNSSPG 660
CSPQPHIHSI HVKEEPVIAE DEDCPMSLVT TANHSPELED DREIEEEPLS EDLE 714

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Gene expression information

Gene expression during embryonic days (E11.5~E18.5) ~ adult days (Ps) in the lip and palate tissues. (X-axis: days, Y-axis: tissues)

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Protein structural annotations

3D structure in PDB database

There is no related protein structure for this gene.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologFOXP2A0A452FUL3Capra hircusPredictionMore>>
1:1 orthologFOXP293986O15409Homo sapiensPublicationMore>>
1:1 orthologFoxp2114142P58463E14.5Mus musculusPredictionMore>>
1:1 orthologFOXP2449627Q8MJA0Pan troglodytesPredictionMore>>
1:1 orthologFOXP2A0A5G2QN29Sus scrofaPredictionMore>>
1:1 orthologFoxp2500037P0CF24Rattus norvegicusPredictionMore>>
1:1 orthologfoxp2H0WFE7Danio rerioPredictionMore>>

Other genetic variants/mutations

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Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA bindingIMP
GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specificIMP
GO:0003677 DNA bindingISS
GO:0003677 DNA bindingIDA
GO:0003700 DNA-binding transcription factor activityIDA
GO:0005515 protein bindingIPI
GO:0042802 identical protein bindingIPI
GO:0042803 protein homodimerization activityISS
GO:0046872 metal ion bindingIEA
GO:0050681 androgen receptor bindingIEA

GO:Biological Process

GO ID GO Term Evidence
GO:0000122 negative regulation of transcription by RNA polymerase IIIDA
GO:0000122 negative regulation of transcription by RNA polymerase IIIMP
GO:0002053 positive regulation of mesenchymal cell proliferationIGI
GO:0007519 skeletal muscle tissue developmentIGI
GO:0009791 post-embryonic developmentIMP
GO:0021549 cerebellum developmentIMP
GO:0021757 caudate nucleus developmentISS
GO:0021758 putamen developmentISS
GO:0021987 cerebral cortex developmentIEA
GO:0030324 lung developmentIGI
GO:0033574 response to testosteroneIEA
GO:0042297 vocal learningIMP
GO:0043010 camera-type eye developmentIMP
GO:0045892 negative regulation of transcription, DNA-templatedIDA
GO:0048286 lung alveolus developmentIMP
GO:0048745 smooth muscle tissue developmentIGI
GO:0050679 positive regulation of epithelial cell proliferationIGI
GO:0060013 righting reflexIMP
GO:0060501 positive regulation of epithelial cell proliferation involved in lung morphogenesisIGI
GO:0098582 innate vocalization behaviorIEA

GO:Cellular Component

GO ID GO Term Evidence
GO:0005634 nucleusIEA

Reactome Pathway

Reactome ID Reactome Term Evidence

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0025 Alternative splicing
KW-0238 DNA-binding
KW-0479 Metal-binding
KW-0539 Nucleus
KW-1185 Reference proteome
KW-0678 Repressor
KW-0804 Transcription
KW-0805 Transcription regulation
KW-0862 Zinc
KW-0863 Zinc-finger

Interpro

InterPro ID InterPro Term
IPR001766 Fork_head_dom
IPR032354 FOXP-CC
IPR030456 TF_fork_head_CS_2
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf

PROSITE

PROSITE ID PROSITE Term
PS00658 FORK_HEAD_2
PS50039 FORK_HEAD_3
PS00028 ZINC_FINGER_C2H2_1

Pfam

Pfam ID Pfam Term
PF00250 Forkhead
PF16159 FOXP-CC

Protein-protein interaction

Protein-miRNA interaction