Gene: recql5

Basic information

Tag Content
Uniprot ID X1WCM8
Entrez ID 566553
Genbank protein ID
Genbank nucleotide ID XM_005164274.3
Ensembl protein ID ENSDARP00000127973
Ensembl nucleotide ID ENSDARG00000059556
Gene name ATP-dependent DNA helicase
Gene symbol recql5
Organism Danio rerio
NCBI taxa ID 7955
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MSVVHRALKT HFGFEKFRSR QQEEAVNALL QGDRDVFVCM PTGAGKSLCY QLPALMASGV 60
TLVISPLIAL IQDQVEHLKA LNVPARSINS KLPLAERRQI LADLESETPR LKLLYITPEM 120
VASPSFQPVL SSLSSRGLLG YLAVDEAHCV SQWGHDFRPD YLKLGDLRSR LQGIRCIALT 180
ATAPKRVKED IERSLRLRSP LVFSTPVFRK NLKYDVIFRD LLPEPYVHLL AFAKEALGGN 240
TAEKGCGIVY CRTRESCEEV AHKLTKLGIA AKPYHAGLKS GDRSENQADW MADKVPIIVA 300
TISFGMGVDK ANVRFVVHWN LAKSLASYYQ ESGRAGRDGL PSSCRIYYSP KDRDQLNFLI 360
RKEISRKQEK RGSEKEQDKA PILDFEAMVA FCEQEGCRHA TISTFFGNEK PNCAGACDFC 420
RDPKLVRAQL ARAAALSTRT NPTHSAEPRG PFGFDPELYA GGRKGYGFER HDEEYGSEED 480
DSEKRKKQFG DLFKKQMSLR KGSDAPKETF VPPDADCVLK DASSQRIPRL TVKSREHCLS 540
LLQECLSSHS GDAEFLHRSE ALDQAVDIEH EIFKSSKSAN IYKAAVLKRV SEMKKSTSVS 600
VTEEKPCESA EEKPTCSSSA QHLDGFTSAS QIYSLKRKRV GAGFRGSSSL FQPAGDLLKS 660
SDQTPGDSTC EEESGKTQKD NNNTSSIKAK SGSSSSLNSP SKKLSRKQQK LAEAARDTRL 720
ISLYFGKKQA QRESSPEPEE TEDACEDRSA SANGVHTLSS SSVDAERAAQ ESLCEVTAHA 780
EDYGENQQSD GQRKSPKQAH EDRSEVRAPS PPVKRRRVLK DTKRVTFDPV VQETQVEALN 840
GDGAGISRKP VTLKEAADIV VRCLDPFYKQ GKFATKDLFK SFARFLSHLL TEGKTPNRGQ 900
VKLEAKRLIK RFFSRTVRCE SESDWMLLKT QDR 933

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologRECQL5512590E1BKM5Bos taurusPredictionMore>>
1:1 orthologRECQL5483317F1PAG8Canis lupus familiarisPredictionMore>>
1:1 orthologRECQL5102169794A0A452E119Capra hircusPredictionMore>>
1:1 orthologRECQL59400O94762Homo sapiensPublicationMore>>
1:1 orthologRecql5170472Q8VID5Mus musculusPredictionMore>>
1:1 orthologRECQL5G1TZG6Oryctolagus cuniculusPredictionMore>>
1:1 orthologRecql5287834D4ACP5Rattus norvegicusPredictionMore>>
1:1 orthologrecql5566553X1WCM8Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005694 chromosome
GO:0005737 cytoplasm
GO:0005634 nucleus
GO:0043138 3'-5' DNA helicase activity
GO:0005524 ATP binding
GO:0009378 four-way junction helicase activity
GO:0003676 nucleic acid binding
GO:0032508 DNA duplex unwinding
GO:0006310 DNA recombination
GO:0006281 DNA repair
GO:0006268 DNA unwinding involved in DNA replication
GO:0000724 double-strand break repair via homologous recombination
GO:0045950 negative regulation of mitotic recombination

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0067 ATP-binding
KW-0347 Helicase
KW-0378 Hydrolase
KW-0547 Nucleotide-binding
KW-0539 Nucleus
KW-1185 Reference proteome

Interpro

InterPro ID InterPro Term
IPR011545 DEAD/DEAH_box_helicase_dom
IPR004589 DNA_helicase_ATP-dep_RecQ
IPR014001 Helicase_ATP-bd
IPR001650 Helicase_C
IPR027417 P-loop_NTPase
IPR010716 RECQ5
IPR032284 RecQ_Zn-bd

PROSITE

PROSITE ID PROSITE Term
PS51192 HELICASE_ATP_BIND_1
PS51194 HELICASE_CTER

Pfam

Pfam ID Pfam Term
PF00270 DEAD
PF00271 Helicase_C
PF06959 RecQ5
PF16124 RecQ_Zn_bind