Gene Page: C2orf82
Summary ?
| GeneID | 389084 |
| Symbol | C2orf82 |
| Synonyms | UNQ830 |
| Description | chromosome 2 open reading frame 82 |
| Reference | HGNC:HGNC:33763|Ensembl:ENSG00000182600|HPRD:15620|Vega:OTTHUMG00000133273 |
| Gene type | protein-coding |
| Map location | 2q37.1 |
| Pascal p-value | 2.729E-11 |
| Fetal beta | -0.219 |
| eGene | Anterior cingulate cortex BA24 Caudate basal ganglia Cerebellum Cortex Frontal Cortex BA9 Hypothalamus Nucleus accumbens basal ganglia Putamen basal ganglia Meta |
Gene in Data Sources
| Gene set name | Method of gene set | Description | Info |
|---|---|---|---|
| CV:GWAScat | Genome-wide Association Studies | This data set includes 560 SNPs associated with schizophrenia. A total of 486 genes were mapped to these SNPs within 50kb. | |
| CV:GWASdb | Genome-wide Association Studies | GWASdb records for schizophrenia | |
| CV:PGCnp | Genome-wide Association Study | GWAS | |
| LK:YES | Genome-wide Association Study | This data set included 99 genes mapped to the 22 regions. The 24 leading SNPs were also included in CV:Ripke_2013 |
Section I. Genetics and epigenetics annotation
eQTL annotation
| SNP ID | Chromosome | Position | eGene | Gene Entrez ID | pvalue | qvalue | TSS distance | eQTL type |
|---|---|---|---|---|---|---|---|---|
| rs1446308 | 2 | 233639309 | C2orf82 | ENSG00000182600.5 | 1.506E-6 | 0 | -94415 | gtex_brain_ba24 |
| rs75433761 | 2 | 233690864 | C2orf82 | ENSG00000182600.5 | 2.512E-6 | 0 | -42860 | gtex_brain_ba24 |
| rs10933412 | 2 | 233707226 | C2orf82 | ENSG00000182600.5 | 1.504E-6 | 0 | -26498 | gtex_brain_ba24 |
| rs4973054 | 2 | 233710713 | C2orf82 | ENSG00000182600.5 | 1.504E-6 | 0 | -23011 | gtex_brain_ba24 |
| rs809639 | 2 | 233731244 | C2orf82 | ENSG00000182600.5 | 9.076E-8 | 0 | -2480 | gtex_brain_ba24 |
| rs709933 | 2 | 233733144 | C2orf82 | ENSG00000182600.5 | 9.076E-8 | 0 | -580 | gtex_brain_ba24 |
| rs709934 | 2 | 233733352 | C2orf82 | ENSG00000182600.5 | 9.076E-8 | 0 | -372 | gtex_brain_ba24 |
| rs778340 | 2 | 233734083 | C2orf82 | ENSG00000182600.5 | 9.076E-8 | 0 | 359 | gtex_brain_ba24 |
| rs2675966 | 2 | 233735543 | C2orf82 | ENSG00000182600.5 | 9.076E-8 | 0 | 1819 | gtex_brain_ba24 |
| rs2592117 | 2 | 233735693 | C2orf82 | ENSG00000182600.5 | 9.076E-8 | 0 | 1969 | gtex_brain_ba24 |
| rs2592116 | 2 | 233735709 | C2orf82 | ENSG00000182600.5 | 9.076E-8 | 0 | 1985 | gtex_brain_ba24 |
| rs2675967 | 2 | 233736133 | C2orf82 | ENSG00000182600.5 | 9.076E-8 | 0 | 2409 | gtex_brain_ba24 |
| rs2592115 | 2 | 233736349 | C2orf82 | ENSG00000182600.5 | 9.076E-8 | 0 | 2625 | gtex_brain_ba24 |
| rs812383 | 2 | 233737132 | C2orf82 | ENSG00000182600.5 | 5.946E-9 | 0 | 3408 | gtex_brain_ba24 |
| rs778339 | 2 | 233739678 | C2orf82 | ENSG00000182600.5 | 9.076E-8 | 0 | 5954 | gtex_brain_ba24 |
| rs778338 | 2 | 233740227 | C2orf82 | ENSG00000182600.5 | 1.633E-6 | 0 | 6503 | gtex_brain_ba24 |
| rs778368 | 2 | 233745333 | C2orf82 | ENSG00000182600.5 | 5.597E-7 | 0 | 11609 | gtex_brain_ba24 |
| rs709938 | 2 | 233746457 | C2orf82 | ENSG00000182600.5 | 1.203E-8 | 0 | 12733 | gtex_brain_ba24 |
| rs202163459 | 2 | 233751327 | C2orf82 | ENSG00000182600.5 | 7.988E-9 | 0 | 17603 | gtex_brain_ba24 |
| rs2592126 | 2 | 233751377 | C2orf82 | ENSG00000182600.5 | 2.266E-6 | 0 | 17653 | gtex_brain_ba24 |
| rs2250654 | 2 | 233752376 | C2orf82 | ENSG00000182600.5 | 8.884E-9 | 0 | 18652 | gtex_brain_ba24 |
| rs2250665 | 2 | 233752639 | C2orf82 | ENSG00000182600.5 | 9.896E-9 | 0 | 18915 | gtex_brain_ba24 |
| rs5839454 | 2 | 233753082 | C2orf82 | ENSG00000182600.5 | 8.477E-7 | 0 | 19358 | gtex_brain_ba24 |
| rs2675957 | 2 | 233754364 | C2orf82 | ENSG00000182600.5 | 1.963E-8 | 0 | 20640 | gtex_brain_ba24 |
| rs2166441 | 2 | 233757443 | C2orf82 | ENSG00000182600.5 | 5.366E-7 | 0 | 23719 | gtex_brain_ba24 |
| rs895431 | 2 | 233759362 | C2orf82 | ENSG00000182600.5 | 5.366E-7 | 0 | 25638 | gtex_brain_ba24 |
| rs2592121 | 2 | 233760519 | C2orf82 | ENSG00000182600.5 | 5.366E-7 | 0 | 26795 | gtex_brain_ba24 |
| rs1562288 | 2 | 233760866 | C2orf82 | ENSG00000182600.5 | 5.368E-7 | 0 | 27142 | gtex_brain_ba24 |
| rs13395246 | 2 | 233761434 | C2orf82 | ENSG00000182600.5 | 4.288E-7 | 0 | 27710 | gtex_brain_ba24 |
| rs13024793 | 2 | 233557043 | C2orf82 | ENSG00000182600.5 | 5.006E-7 | 0 | -176681 | gtex_brain_putamen_basal |
| rs4458205 | 2 | 233557646 | C2orf82 | ENSG00000182600.5 | 6.445E-7 | 0 | -176078 | gtex_brain_putamen_basal |
| rs12472839 | 2 | 233559615 | C2orf82 | ENSG00000182600.5 | 4.981E-7 | 0 | -174109 | gtex_brain_putamen_basal |
| rs12997185 | 2 | 233560587 | C2orf82 | ENSG00000182600.5 | 4.858E-7 | 0 | -173137 | gtex_brain_putamen_basal |
| rs13007783 | 2 | 233566679 | C2orf82 | ENSG00000182600.5 | 9.183E-7 | 0 | -167045 | gtex_brain_putamen_basal |
| rs2012221 | 2 | 233566848 | C2orf82 | ENSG00000182600.5 | 9.178E-7 | 0 | -166876 | gtex_brain_putamen_basal |
| rs983430 | 2 | 233567114 | C2orf82 | ENSG00000182600.5 | 9.147E-7 | 0 | -166610 | gtex_brain_putamen_basal |
| rs6747645 | 2 | 233571033 | C2orf82 | ENSG00000182600.5 | 3.3E-6 | 0 | -162691 | gtex_brain_putamen_basal |
| rs7578299 | 2 | 233573469 | C2orf82 | ENSG00000182600.5 | 8.611E-7 | 0 | -160255 | gtex_brain_putamen_basal |
| rs35395584 | 2 | 233573698 | C2orf82 | ENSG00000182600.5 | 8.593E-7 | 0 | -160026 | gtex_brain_putamen_basal |
| rs11692545 | 2 | 233574396 | C2orf82 | ENSG00000182600.5 | 8.453E-7 | 0 | -159328 | gtex_brain_putamen_basal |
| rs35621474 | 2 | 233574812 | C2orf82 | ENSG00000182600.5 | 8.45E-7 | 0 | -158912 | gtex_brain_putamen_basal |
| rs6739638 | 2 | 233576015 | C2orf82 | ENSG00000182600.5 | 8.547E-7 | 0 | -157709 | gtex_brain_putamen_basal |
| rs1022330 | 2 | 233577330 | C2orf82 | ENSG00000182600.5 | 8.539E-7 | 0 | -156394 | gtex_brain_putamen_basal |
| rs4517962 | 2 | 233578337 | C2orf82 | ENSG00000182600.5 | 8.501E-7 | 0 | -155387 | gtex_brain_putamen_basal |
| rs6714245 | 2 | 233580505 | C2orf82 | ENSG00000182600.5 | 8.473E-7 | 0 | -153219 | gtex_brain_putamen_basal |
| rs7591176 | 2 | 233581803 | C2orf82 | ENSG00000182600.5 | 8.449E-7 | 0 | -151921 | gtex_brain_putamen_basal |
| rs6761324 | 2 | 233582793 | C2orf82 | ENSG00000182600.5 | 8.429E-7 | 0 | -150931 | gtex_brain_putamen_basal |
| rs13003675 | 2 | 233584109 | C2orf82 | ENSG00000182600.5 | 1.032E-6 | 0 | -149615 | gtex_brain_putamen_basal |
| rs13004406 | 2 | 233584557 | C2orf82 | ENSG00000182600.5 | 8.388E-7 | 0 | -149167 | gtex_brain_putamen_basal |
| rs9679089 | 2 | 233585327 | C2orf82 | ENSG00000182600.5 | 3.662E-6 | 0 | -148397 | gtex_brain_putamen_basal |
| rs35285732 | 2 | 233588172 | C2orf82 | ENSG00000182600.5 | 9.987E-7 | 0 | -145552 | gtex_brain_putamen_basal |
| rs112133824 | 2 | 233588474 | C2orf82 | ENSG00000182600.5 | 8.264E-7 | 0 | -145250 | gtex_brain_putamen_basal |
| rs6745879 | 2 | 233590007 | C2orf82 | ENSG00000182600.5 | 8.228E-7 | 0 | -143717 | gtex_brain_putamen_basal |
| rs6717841 | 2 | 233590255 | C2orf82 | ENSG00000182600.5 | 8.789E-7 | 0 | -143469 | gtex_brain_putamen_basal |
| rs6733151 | 2 | 233592341 | C2orf82 | ENSG00000182600.5 | 8.098E-7 | 0 | -141383 | gtex_brain_putamen_basal |
| rs6724117 | 2 | 233593660 | C2orf82 | ENSG00000182600.5 | 8.119E-7 | 0 | -140064 | gtex_brain_putamen_basal |
| rs13008942 | 2 | 233594875 | C2orf82 | ENSG00000182600.5 | 7.785E-7 | 0 | -138849 | gtex_brain_putamen_basal |
| rs397988242 | 2 | 233596592 | C2orf82 | ENSG00000182600.5 | 7.53E-7 | 0 | -137132 | gtex_brain_putamen_basal |
| rs12478564 | 2 | 233598340 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -135384 | gtex_brain_putamen_basal |
| rs11555646 | 2 | 233599904 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -133820 | gtex_brain_putamen_basal |
| rs13013142 | 2 | 233600606 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -133118 | gtex_brain_putamen_basal |
| rs6738386 | 2 | 233602028 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -131696 | gtex_brain_putamen_basal |
| rs66549961 | 2 | 233602293 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -131431 | gtex_brain_putamen_basal |
| rs13035829 | 2 | 233604487 | C2orf82 | ENSG00000182600.5 | 8.756E-7 | 0 | -129237 | gtex_brain_putamen_basal |
| rs6732136 | 2 | 233604580 | C2orf82 | ENSG00000182600.5 | 5.072E-7 | 0 | -129144 | gtex_brain_putamen_basal |
| rs7562712 | 2 | 233606580 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -127144 | gtex_brain_putamen_basal |
| rs7606090 | 2 | 233606740 | C2orf82 | ENSG00000182600.5 | 7.437E-7 | 0 | -126984 | gtex_brain_putamen_basal |
| rs67013068 | 2 | 233608253 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -125471 | gtex_brain_putamen_basal |
| rs11687128 | 2 | 233608901 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -124823 | gtex_brain_putamen_basal |
| rs3817311 | 2 | 233612557 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -121167 | gtex_brain_putamen_basal |
| rs11679079 | 2 | 233612656 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -121068 | gtex_brain_putamen_basal |
| rs35362030 | 2 | 233612845 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -120879 | gtex_brain_putamen_basal |
| rs13011298 | 2 | 233612996 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -120728 | gtex_brain_putamen_basal |
| rs34880628 | 2 | 233614819 | C2orf82 | ENSG00000182600.5 | 7.971E-7 | 0 | -118905 | gtex_brain_putamen_basal |
| rs12474040 | 2 | 233615345 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -118379 | gtex_brain_putamen_basal |
| rs12991088 | 2 | 233617520 | C2orf82 | ENSG00000182600.5 | 7.925E-7 | 0 | -116204 | gtex_brain_putamen_basal |
| rs12990821 | 2 | 233617585 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -116139 | gtex_brain_putamen_basal |
| rs71421663 | 2 | 233619131 | C2orf82 | ENSG00000182600.5 | 7.427E-7 | 0 | -114593 | gtex_brain_putamen_basal |
| rs36007169 | 2 | 233621834 | C2orf82 | ENSG00000182600.5 | 7.448E-7 | 0 | -111890 | gtex_brain_putamen_basal |
| rs12987513 | 2 | 233622066 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -111658 | gtex_brain_putamen_basal |
| rs13021246 | 2 | 233623111 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -110613 | gtex_brain_putamen_basal |
| rs35085837 | 2 | 233624363 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -109361 | gtex_brain_putamen_basal |
| rs10933409 | 2 | 233629386 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -104338 | gtex_brain_putamen_basal |
| rs6748027 | 2 | 233629552 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -104172 | gtex_brain_putamen_basal |
| rs1801251 | 2 | 233633460 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -100264 | gtex_brain_putamen_basal |
| rs1044480 | 2 | 233633736 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -99988 | gtex_brain_putamen_basal |
| rs33980184 | 2 | 233634085 | C2orf82 | ENSG00000182600.5 | 9.816E-7 | 0 | -99639 | gtex_brain_putamen_basal |
| rs56777991 | 2 | 233635388 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -98336 | gtex_brain_putamen_basal |
| rs59336151 | 2 | 233635438 | C2orf82 | ENSG00000182600.5 | 6.117E-7 | 0 | -98286 | gtex_brain_putamen_basal |
| rs1446308 | 2 | 233639309 | C2orf82 | ENSG00000182600.5 | 4.015E-8 | 0 | -94415 | gtex_brain_putamen_basal |
| rs737028 | 2 | 233640750 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -92974 | gtex_brain_putamen_basal |
| rs283486 | 2 | 233644223 | C2orf82 | ENSG00000182600.5 | 7.554E-7 | 0 | -89501 | gtex_brain_putamen_basal |
| rs283485 | 2 | 233645691 | C2orf82 | ENSG00000182600.5 | 7.836E-7 | 0 | -88033 | gtex_brain_putamen_basal |
| rs2592105 | 2 | 233645968 | C2orf82 | ENSG00000182600.5 | 7.321E-7 | 0 | -87756 | gtex_brain_putamen_basal |
| rs283484 | 2 | 233646505 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -87219 | gtex_brain_putamen_basal |
| rs283481 | 2 | 233648091 | C2orf82 | ENSG00000182600.5 | 7.971E-7 | 0 | -85633 | gtex_brain_putamen_basal |
| rs283480 | 2 | 233648742 | C2orf82 | ENSG00000182600.5 | 7.971E-7 | 0 | -84982 | gtex_brain_putamen_basal |
| rs283479 | 2 | 233648754 | C2orf82 | ENSG00000182600.5 | 7.971E-7 | 0 | -84970 | gtex_brain_putamen_basal |
| rs283477 | 2 | 233649427 | C2orf82 | ENSG00000182600.5 | 7.971E-7 | 0 | -84297 | gtex_brain_putamen_basal |
| rs283476 | 2 | 233650168 | C2orf82 | ENSG00000182600.5 | 8.018E-7 | 0 | -83556 | gtex_brain_putamen_basal |
| rs283475 | 2 | 233654381 | C2orf82 | ENSG00000182600.5 | 7.971E-7 | 0 | -79343 | gtex_brain_putamen_basal |
| rs283474 | 2 | 233654627 | C2orf82 | ENSG00000182600.5 | 7.971E-7 | 0 | -79097 | gtex_brain_putamen_basal |
| rs283471 | 2 | 233656627 | C2orf82 | ENSG00000182600.5 | 7.971E-7 | 0 | -77097 | gtex_brain_putamen_basal |
| rs283469 | 2 | 233656997 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -76727 | gtex_brain_putamen_basal |
| rs283468 | 2 | 233658309 | C2orf82 | ENSG00000182600.5 | 1.816E-7 | 0 | -75415 | gtex_brain_putamen_basal |
| rs778166 | 2 | 233664097 | C2orf82 | ENSG00000182600.5 | 7.682E-7 | 0 | -69627 | gtex_brain_putamen_basal |
| rs369385093 | 2 | 233668995 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -64729 | gtex_brain_putamen_basal |
| rs2674839 | 2 | 233669040 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -64684 | gtex_brain_putamen_basal |
| rs2592113 | 2 | 233669553 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -64171 | gtex_brain_putamen_basal |
| rs4973053 | 2 | 233670099 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -63625 | gtex_brain_putamen_basal |
| rs397787735 | 2 | 233670725 | C2orf82 | ENSG00000182600.5 | 5.954E-7 | 0 | -62999 | gtex_brain_putamen_basal |
| rs1867778 | 2 | 233679644 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -54080 | gtex_brain_putamen_basal |
| rs75433761 | 2 | 233690864 | C2orf82 | ENSG00000182600.5 | 1.035E-6 | 0 | -42860 | gtex_brain_putamen_basal |
| rs7558609 | 2 | 233700379 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -33345 | gtex_brain_putamen_basal |
| rs76340079 | 2 | 233701109 | C2orf82 | ENSG00000182600.5 | 1.64E-6 | 0 | -32615 | gtex_brain_putamen_basal |
| rs1446311 | 2 | 233705071 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -28653 | gtex_brain_putamen_basal |
| rs7587309 | 2 | 233705702 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -28022 | gtex_brain_putamen_basal |
| rs11676216 | 2 | 233706368 | C2orf82 | ENSG00000182600.5 | 3.585E-7 | 0 | -27356 | gtex_brain_putamen_basal |
| rs10933411 | 2 | 233706847 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -26877 | gtex_brain_putamen_basal |
| rs10933412 | 2 | 233707226 | C2orf82 | ENSG00000182600.5 | 2.921E-8 | 0 | -26498 | gtex_brain_putamen_basal |
| rs12694917 | 2 | 233707611 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -26113 | gtex_brain_putamen_basal |
| rs3816334 | 2 | 233708806 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -24918 | gtex_brain_putamen_basal |
| rs4973054 | 2 | 233710713 | C2orf82 | ENSG00000182600.5 | 2.921E-8 | 0 | -23011 | gtex_brain_putamen_basal |
| rs991873 | 2 | 233711046 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -22678 | gtex_brain_putamen_basal |
| rs5839450 | 2 | 233711381 | C2orf82 | ENSG00000182600.5 | 7.856E-7 | 0 | -22343 | gtex_brain_putamen_basal |
| rs2305137 | 2 | 233712049 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -21675 | gtex_brain_putamen_basal |
| rs10555297 | 2 | 233712226 | C2orf82 | ENSG00000182600.5 | 5.915E-7 | 0 | -21498 | gtex_brain_putamen_basal |
| rs6437074 | 2 | 233712296 | C2orf82 | ENSG00000182600.5 | 7.442E-7 | 0 | -21428 | gtex_brain_putamen_basal |
| rs2044449 | 2 | 233718808 | C2orf82 | ENSG00000182600.5 | 7.327E-7 | 0 | -14916 | gtex_brain_putamen_basal |
| rs2100053 | 2 | 233719516 | C2orf82 | ENSG00000182600.5 | 7.294E-7 | 0 | -14208 | gtex_brain_putamen_basal |
| rs4973055 | 2 | 233720283 | C2orf82 | ENSG00000182600.5 | 1.32E-6 | 0 | -13441 | gtex_brain_putamen_basal |
| rs4973056 | 2 | 233720765 | C2orf82 | ENSG00000182600.5 | 5.788E-7 | 0 | -12959 | gtex_brain_putamen_basal |
| rs1947105 | 2 | 233721455 | C2orf82 | ENSG00000182600.5 | 7.23E-7 | 0 | -12269 | gtex_brain_putamen_basal |
| rs7589201 | 2 | 233724536 | C2orf82 | ENSG00000182600.5 | 7.062E-7 | 0 | -9188 | gtex_brain_putamen_basal |
| rs895430 | 2 | 233725483 | C2orf82 | ENSG00000182600.5 | 6.958E-7 | 0 | -8241 | gtex_brain_putamen_basal |
| rs2675971 | 2 | 233726154 | C2orf82 | ENSG00000182600.5 | 6.55E-7 | 0 | -7570 | gtex_brain_putamen_basal |
| rs2592102 | 2 | 233726772 | C2orf82 | ENSG00000182600.5 | 6.306E-7 | 0 | -6952 | gtex_brain_putamen_basal |
| rs2675973 | 2 | 233727026 | C2orf82 | ENSG00000182600.5 | 6.196E-7 | 0 | -6698 | gtex_brain_putamen_basal |
| rs2675974 | 2 | 233727071 | C2orf82 | ENSG00000182600.5 | 6.182E-7 | 0 | -6653 | gtex_brain_putamen_basal |
| rs809639 | 2 | 233731244 | C2orf82 | ENSG00000182600.5 | 1.791E-9 | 0 | -2480 | gtex_brain_putamen_basal |
| rs709933 | 2 | 233733144 | C2orf82 | ENSG00000182600.5 | 1.791E-9 | 0 | -580 | gtex_brain_putamen_basal |
| rs709934 | 2 | 233733352 | C2orf82 | ENSG00000182600.5 | 1.791E-9 | 0 | -372 | gtex_brain_putamen_basal |
| rs778340 | 2 | 233734083 | C2orf82 | ENSG00000182600.5 | 1.791E-9 | 0 | 359 | gtex_brain_putamen_basal |
| rs2675966 | 2 | 233735543 | C2orf82 | ENSG00000182600.5 | 1.791E-9 | 0 | 1819 | gtex_brain_putamen_basal |
| rs2592117 | 2 | 233735693 | C2orf82 | ENSG00000182600.5 | 1.791E-9 | 0 | 1969 | gtex_brain_putamen_basal |
| rs2592116 | 2 | 233735709 | C2orf82 | ENSG00000182600.5 | 1.791E-9 | 0 | 1985 | gtex_brain_putamen_basal |
| rs2675967 | 2 | 233736133 | C2orf82 | ENSG00000182600.5 | 1.791E-9 | 0 | 2409 | gtex_brain_putamen_basal |
| rs2592115 | 2 | 233736349 | C2orf82 | ENSG00000182600.5 | 1.791E-9 | 0 | 2625 | gtex_brain_putamen_basal |
| rs812383 | 2 | 233737132 | C2orf82 | ENSG00000182600.5 | 5.923E-11 | 0 | 3408 | gtex_brain_putamen_basal |
| rs778339 | 2 | 233739678 | C2orf82 | ENSG00000182600.5 | 2.025E-9 | 0 | 5954 | gtex_brain_putamen_basal |
| rs778338 | 2 | 233740227 | C2orf82 | ENSG00000182600.5 | 3.268E-8 | 0 | 6503 | gtex_brain_putamen_basal |
| rs778368 | 2 | 233745333 | C2orf82 | ENSG00000182600.5 | 4.921E-7 | 0 | 11609 | gtex_brain_putamen_basal |
| rs709938 | 2 | 233746457 | C2orf82 | ENSG00000182600.5 | 5.923E-11 | 0 | 12733 | gtex_brain_putamen_basal |
| rs202163459 | 2 | 233751327 | C2orf82 | ENSG00000182600.5 | 7.862E-11 | 0 | 17603 | gtex_brain_putamen_basal |
| rs2592126 | 2 | 233751377 | C2orf82 | ENSG00000182600.5 | 1.374E-8 | 0 | 17653 | gtex_brain_putamen_basal |
| rs2250654 | 2 | 233752376 | C2orf82 | ENSG00000182600.5 | 1.456E-10 | 0 | 18652 | gtex_brain_putamen_basal |
| rs2250665 | 2 | 233752639 | C2orf82 | ENSG00000182600.5 | 1.572E-10 | 0 | 18915 | gtex_brain_putamen_basal |
| rs5839454 | 2 | 233753082 | C2orf82 | ENSG00000182600.5 | 8.59E-8 | 0 | 19358 | gtex_brain_putamen_basal |
| rs2675957 | 2 | 233754364 | C2orf82 | ENSG00000182600.5 | 3.016E-10 | 0 | 20640 | gtex_brain_putamen_basal |
| rs66645273 | 2 | 233756671 | C2orf82 | ENSG00000182600.5 | 1.108E-7 | 0 | 22947 | gtex_brain_putamen_basal |
| rs2166441 | 2 | 233757443 | C2orf82 | ENSG00000182600.5 | 1.812E-9 | 0 | 23719 | gtex_brain_putamen_basal |
| rs895431 | 2 | 233759362 | C2orf82 | ENSG00000182600.5 | 1.812E-9 | 0 | 25638 | gtex_brain_putamen_basal |
| rs2592121 | 2 | 233760519 | C2orf82 | ENSG00000182600.5 | 1.812E-9 | 0 | 26795 | gtex_brain_putamen_basal |
| rs1562288 | 2 | 233760866 | C2orf82 | ENSG00000182600.5 | 1.809E-9 | 0 | 27142 | gtex_brain_putamen_basal |
| rs13395246 | 2 | 233761434 | C2orf82 | ENSG00000182600.5 | 1.431E-6 | 0 | 27710 | gtex_brain_putamen_basal |
| rs809017 | 2 | 233774183 | C2orf82 | ENSG00000182600.5 | 5.604E-7 | 0 | 40459 | gtex_brain_putamen_basal |
Section II. Transcriptome annotation
General gene expression (GTEx)
Gene expression during devlopment (BrainCloud)
Footnote:
A total of 269 time points ploted, with n=38 fetal samples (x=1:38). Each triangle represents one time point.
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
No co-expressed genes in brain regions
Section V. Pathway annotation
| Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
|---|---|---|---|
| MCBRYAN PUBERTAL BREAST 3 4WK UP | 214 | 144 | All SZGR 2.0 genes in this pathway |
| PEREZ TP53 TARGETS | 1174 | 695 | All SZGR 2.0 genes in this pathway |
| KONDO EZH2 TARGETS | 245 | 148 | All SZGR 2.0 genes in this pathway |
| ACEVEDO LIVER TUMOR VS NORMAL ADJACENT TISSUE DN | 274 | 165 | All SZGR 2.0 genes in this pathway |
| MARTENS TRETINOIN RESPONSE UP | 857 | 456 | All SZGR 2.0 genes in this pathway |
| BRUINS UVC RESPONSE VIA TP53 GROUP A | 898 | 516 | All SZGR 2.0 genes in this pathway |
| GOBERT OLIGODENDROCYTE DIFFERENTIATION DN | 1080 | 713 | All SZGR 2.0 genes in this pathway |
| LIM MAMMARY STEM CELL DN | 428 | 246 | All SZGR 2.0 genes in this pathway |