Gene info: ID 100507053

Gene: LOC100507053

GENE ID: 100507053

Synonyms: -

Description: uncharacterized LOC100507053

Gene type: ncRNA

Location: 4q23

dbXrefs: Ensembl:ENSG00000246090

RefSeq: NC_000004.12

Retrived from: SNP Mapped

SNPs: 12 ANCO-SNPs

Phenotype: AD

# Publications: 0

Sherlock p-value : NA (AD) NA (ND) (Frontal_Cortex)

Pascal p-value : 4.463e-1 (AD) 3.936e-1 (ND)

ANCO-SNPs

SNP ID	Position	Alleles	Trait	Variation Type
rs904092	chr4:99293007 (GRCh38.p7)	A>G / A>T	alcohol dependence	SNV(Single Nucleotide Variation)
rs17028615	chr4:99150767 (GRCh38.p7)	A>G	alcohol dependence	SNV(Single Nucleotide Variation)
rs4148883	chr4:99145181 (GRCh38.p7)	T>C	alcohol dependence	SNV(Single Nucleotide Variation)
rs6831352	chr4:99142374 (GRCh38.p7)	T>A / T>C	alcohol dependence	SNV(Single Nucleotide Variation)
rs6532800	chr4:99137733 (GRCh38.p7)	T>C / T>G	alcohol dependence	SNV(Single Nucleotide Variation)
rs6532798	chr4:99133676 (GRCh38.p7)	C>T	alcohol dependence	SNV(Single Nucleotide Variation)
rs6822348	chr4:99132743 (GRCh38.p7)	A>T	alcohol dependence	SNV(Single Nucleotide Variation)
rs1126670	chr4:99131582 (GRCh38.p7)	C>A	alcohol dependence	SNV(Single Nucleotide Variation)
rs4699710	chr4:99130668 (GRCh38.p7)	C>T	alcohol dependence	SNV(Single Nucleotide Variation)
rs6836440	chr4:99127355 (GRCh38.p7)	G>A	alcohol dependence	SNV(Single Nucleotide Variation)
rs1126671	chr4:99127263 (GRCh38.p7)	T>C	alcohol dependence	SNV(Single Nucleotide Variation)
rs1573495	chr4:99125534 (GRCh38.p7)	T>C	alcohol dependence	SNV(Single Nucleotide Variation)

DNA Methylation

There is no related methylation information for this gene.

Gene Expression in Different Tissues

Temporal and Spatial Expressions (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes average value of the expressions.

There is no DrugBank record for this gene !

There is no CTD record for this GENE !

GO/Pathway

GO ID	GO Term	Qualifier	Evidence	PubMed

GO ID	GO Term	Qualifier	Evidence	PubMed

GO ID	GO Term	Qualifier	Evidence	PubMed

KEGG ID	KEGG Term

Reactome ID	Reactome Term	Evidence

Interactions (STRING v10.5, Interaction Score >= 0.400)

There is no Interaction data for this gene.

Publications (Co-occurrence of gene symbol strings and ANCO-Dependence terms)

PMID	Title (Year)	Author	Journal