DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
ACSTS
Uniprot ID:
Q13003
Source protein:
Glutamate receptor ionotropic, kainate 3
Source gene:
GRIK3
Class:
DEG_SPOP_SBC_1
Location:
909:913
E3 ligase:
SPOP
DEGRON score:
0.9784
ASA_SCORE:
72.84
COIL:
0.7594
CONS_SCORE:
0.2791
DSS_SCORE:
0.5071
HELIX:
0.1672
FCONS_SCORE:
1.0049
RIG_SCORE:
0.7331
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R900H
TCGA-2H-A9GL
ESCA
TCGA
ACSTS
DEG_SPOP_SBC_1
0.0833
p.P903A
TCGA-85-7844
LUSC
TCGA
ACSTS
DEG_SPOP_SBC_1
0.1667
p.P903A
DO27136
LUSC
ICGC
ACSTS
DEG_SPOP_SBC_1
0.1667
p.P919H
TCGA-A5-A0GP
UCEC
TCGA
ACSTS
DEG_SPOP_SBC_1
0.1667
p.P919H
TCGA-DA-A1I1
SKCM
TCGA
ACSTS
DEG_SPOP_SBC_1
0.1667
p.P919H
DO37966
SKCM
ICGC
ACSTS
DEG_SPOP_SBC_1
0.1667
p.P919H
DO41109
UCEC
ICGC
ACSTS
DEG_SPOP_SBC_1
0.1667
p.R901W
TCGA-AA-3852
COAD
TCGA
ACSTS
DEG_SPOP_SBC_1
0.1111
p.R901W
DO8471
COAD
ICGC
ACSTS
DEG_SPOP_SBC_1
0.1111
p.P916T
TCGA-AJ-A2QM
UCEC
TCGA
ACSTS
DEG_SPOP_SBC_1
0.25
p.P916T
DO43690
UCEC
ICGC
ACSTS
DEG_SPOP_SBC_1
0.25
p.P919S
TCGA-D3-A8GC
SKCM
TCGA
ACSTS
DEG_SPOP_SBC_1
0.1667
p.P919S
DO50281
SKCM
ICGC
ACSTS
DEG_SPOP_SBC_1
0.1667
p.R900C
TCGA-D3-A8GI
SKCM
TCGA
ACSTS
DEG_SPOP_SBC_1
0.0833
p.R900C
DO50284
SKCM
ICGC
ACSTS
DEG_SPOP_SBC_1
0.0833
p.S911R
TCGA-DX-A7EL
SARC
TCGA
ACSTS
DEG_SPOP_SBC_1
0.7427
p.S911R
DO220024
SARC
ICGC
ACSTS
DEG_SPOP_SBC_1
0.7427
p.P903T
TCGA-FI-A2D6
UCEC
TCGA
ACSTS
DEG_SPOP_SBC_1
0.1667
p.P903T
DO43867
UCEC
ICGC
ACSTS
DEG_SPOP_SBC_1
0.1667
p.M908I
TCGA-FR-A726
SKCM
TCGA
ACSTS
DEG_SPOP_SBC_1
0.3056
p.M908I
DO48665
SKCM
ICGC
ACSTS
DEG_SPOP_SBC_1
0.3056
p.P903S
TCGA-Z2-AA3V
SKCM
TCGA
ACSTS
DEG_SPOP_SBC_1
0.1667
p.P903S
DO51303
SKCM
ICGC
ACSTS
DEG_SPOP_SBC_1
0.1667
p.R901Q
DO52760
CMDI
ICGC
ACSTS
DEG_SPOP_SBC_1
0.1111
p.R901Q
SIDM01292
Esophageal Carcinoma
GDSC
ACSTS
DEG_SPOP_SBC_1
0.1111
p.D899E
SIDM02075
Colorectal Carcinoma
GDSC
ACSTS
DEG_SPOP_SBC_1
0.0556
p.G904S
SIDM00216
Colorectal Carcinoma
GDSC
ACSTS
DEG_SPOP_SBC_1
0.1944
p.G904S
ACH-000989
Colon/Colorectal Cancer
CCLE
ACSTS
DEG_SPOP_SBC_1
0.1944
p.G904S
SNU-175
large_intestine
COSMIC
ACSTS
DEG_SPOP_SBC_1
0.1944
p.T912A
ACH-001061
Colon/Colorectal Cancer
CCLE
ACSTS
DEG_SPOP_SBC_1
0.7139
Drug responses associated with GRIK3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ACSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P78314
SH3 domain-binding protein 2
DEG_SPOP_SBC_1
314:318
ACSTS
SPOP
0.7557
More...
Q13003
Glutamate receptor ionotropic, kainate 3
DEG_SPOP_SBC_1
909:913
ACSTS
SPOP
0.9784
More...
Q9H2X6
Homeodomain-interacting protein kinase 2
DEG_SPOP_SBC_1
850:854
ACSTS
SPOP
0.9719
More...
Q9UL49
Transcription factor-like 5 protein
DEG_SPOP_SBC_1
264:268
ACSTS
SPOP
0.8508
More...