DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
DKENL
Uniprot ID:
Q5MIZ7
Source protein:
Serine/threonine-protein phosphatase 4 regulatory subunit 3B
Source gene:
PPP4R3B
Class:
DEG_APCC_KENBOX_2
Location:
759:763
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.996
ASA_SCORE:
105.2
COIL:
0.7202
CONS_SCORE:
0.2744
DSS_SCORE:
0.6669
HELIX:
0.2748
FCONS_SCORE:
1.1516
RIG_SCORE:
0.6842
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T767S
SIDM01612
Endometrial Carcinoma
GDSC
DKENL
DEG_APCC_KENBOX_2
0.2222
p.N762Y
SIDM01435
Hepatocellular Carcinoma
GDSC
DKENL
DEG_APCC_KENBOX_2
0.7059
p.R761L
CAL-78
bone
COSMIC
DKENL
DEG_APCC_KENBOX_2
0.8428
p.S768F
CW-2
large_intestine
COSMIC
DKENL
DEG_APCC_KENBOX_2
0.6389
Drug responses associated with PPP4R3B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DKENL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P17022
Zinc finger protein 18
DEG_APCC_KENBOX_2
294:298
DKENL
APC,CDC20,FZR1
0.9976
More...
Q5MIZ7
Serine/threonine-protein phosphatase 4 regulatory subunit 3B
DEG_APCC_KENBOX_2
759:763
DKENL
APC,CDC20,FZR1
0.996
More...
Q9BZI7
Regulator of nonsense transcripts 3B
DEG_APCC_KENBOX_2
305:309
DKENL
APC,CDC20,FZR1
0.9885
More...
Q96JM4
Leucine-rich repeat and IQ domain-containing protein 1
DEG_APCC_KENBOX_2
1499:1503
DKENL
APC,CDC20,FZR1
0.9715
More...