DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DKENL
Uniprot ID:
Q96JM4
Source protein:
Leucine-rich repeat and IQ domain-containing protein 1
Source gene:
LRRIQ1
Class:
DEG_APCC_KENBOX_2
Location:
1499:1503
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9715
ASA_SCORE:
103.48
COIL:
0.8018
CONS_SCORE:
0.584
DSS_SCORE:
0.511
HELIX:
0.1768
FCONS_SCORE:
0.9494
RIG_SCORE:
0.709
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.W1495C
TCGA-17-Z045
LUAD
TCGA
DKENL
DEG_APCC_KENBOX_2
0.2222
p.Q1510K
TCGA-32-2491
GBM
TCGA
DKENL
DEG_APCC_KENBOX_2
0.1389
p.Q1510K
DO13354
GBM
ICGC
DKENL
DEG_APCC_KENBOX_2
0.1389
p.T1509I
TCGA-AX-A1CE
UCEC
TCGA
DKENL
DEG_APCC_KENBOX_2
0.1667
p.T1509I
DO42280
UCEC
ICGC
DKENL
DEG_APCC_KENBOX_2
0.1667
p.S1489C
TCGA-DK-AA71
BLCA
TCGA
DKENL
DEG_APCC_KENBOX_2
0.0556
p.S1489C
DO219010
BLCA
ICGC
DKENL
DEG_APCC_KENBOX_2
0.0556
p.C1497F
DO229036
LICA
ICGC
DKENL
DEG_APCC_KENBOX_2
0.2778
p.D1499N
DO221126
MALY
ICGC
DKENL
DEG_APCC_KENBOX_2
0.5821
p.L1503V
SIDM01218
Other Solid Cancers
GDSC
DKENL
DEG_APCC_KENBOX_2
0.5654
p.L1503V
ACH-001530
Endometrial/Uterine Cancer
CCLE
DKENL
DEG_APCC_KENBOX_2
0.5654
p.L1503V
JEG-3
placenta
COSMIC
DKENL
DEG_APCC_KENBOX_2
0.5654
Drug responses associated with LRRIQ1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DKENL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P17022
Zinc finger protein 18
DEG_APCC_KENBOX_2
294:298
DKENL
APC,CDC20,FZR1
0.9976
More...
Q5MIZ7
Serine/threonine-protein phosphatase 4 regulatory subunit 3B
DEG_APCC_KENBOX_2
759:763
DKENL
APC,CDC20,FZR1
0.996
More...
Q9BZI7
Regulator of nonsense transcripts 3B
DEG_APCC_KENBOX_2
305:309
DKENL
APC,CDC20,FZR1
0.9885
More...
Q96JM4
Leucine-rich repeat and IQ domain-containing protein 1
DEG_APCC_KENBOX_2
1499:1503
DKENL
APC,CDC20,FZR1
0.9715
More...