DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
DRDSGE
Uniprot ID:
Q9Y5E5
Source protein:
Protocadherin beta-4
Source gene:
PCDHB4
Class:
DEG_Kelch_Keap1_1
Location:
371:376
E3 ligase:
KEAP1
DEGRON score:
0.5628
ASA_SCORE:
70.6833
COIL:
0.7567
CONS_SCORE:
0.6202
DSS_SCORE:
0.2768
HELIX:
0.1155
FCONS_SCORE:
1.1677
RIG_SCORE:
0.714
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S374Y
TCGA-44-7672
LUAD
TCGA
DRDSGE
DEG_Kelch_Keap1_1
0.712
p.S374Y
DO23576
LUAD
ICGC
DRDSGE
DEG_Kelch_Keap1_1
0.712
p.D371N
TCGA-61-2612
OV
TCGA
DRDSGE
DEG_Kelch_Keap1_1
0.5821
p.D371N
DO28161
OV
ICGC
DRDSGE
DEG_Kelch_Keap1_1
0.5821
p.R368Q
TCGA-DK-A6AW
BLCA
TCGA
DRDSGE
DEG_Kelch_Keap1_1
0.25
p.R368Q
TCGA-EO-A22X
UCEC
TCGA
DRDSGE
DEG_Kelch_Keap1_1
0.25
p.R368Q
TCGA-F5-6814
READ
TCGA
DRDSGE
DEG_Kelch_Keap1_1
0.25
p.R368Q
DO48566
BLCA
ICGC
DRDSGE
DEG_Kelch_Keap1_1
0.25
p.R368Q
DO36556
READ
ICGC
DRDSGE
DEG_Kelch_Keap1_1
0.25
p.R368Q
DO43907
UCEC
ICGC
DRDSGE
DEG_Kelch_Keap1_1
0.25
p.P385S
TCGA-EE-A29P
SKCM
TCGA
DRDSGE
DEG_Kelch_Keap1_1
0.0833
p.P385S
DO229013
COCA
ICGC
DRDSGE
DEG_Kelch_Keap1_1
0.0833
p.P385S
DO229346
LAML
ICGC
DRDSGE
DEG_Kelch_Keap1_1
0.0833
p.P385S
DO37916
SKCM
ICGC
DRDSGE
DEG_Kelch_Keap1_1
0.0833
p.P385S
SIDM00287
B-Lymphoblastic Leukemia
GDSC
DRDSGE
DEG_Kelch_Keap1_1
0.0833
p.P385S
SIDM00596
Endometrial Carcinoma
GDSC
DRDSGE
DEG_Kelch_Keap1_1
0.0833
p.P385S
SIDM00247
Gastric Carcinoma
GDSC
DRDSGE
DEG_Kelch_Keap1_1
0.0833
p.P385S
SIDM00192
Colorectal Carcinoma
GDSC
DRDSGE
DEG_Kelch_Keap1_1
0.0833
p.P385S
SIDM01689
B-Lymphoblastic Leukemia
GDSC
DRDSGE
DEG_Kelch_Keap1_1
0.0833
p.P385S
SIDM00160
Biliary Tract Carcinoma
GDSC
DRDSGE
DEG_Kelch_Keap1_1
0.0833
p.P385S
SIDM01394
Kidney Carcinoma
GDSC
DRDSGE
DEG_Kelch_Keap1_1
0.0833
p.P385S
SIDM01574
Plasma Cell Myeloma
GDSC
DRDSGE
DEG_Kelch_Keap1_1
0.0833
p.P385S
SIDM01434
Hepatocellular Carcinoma
GDSC
DRDSGE
DEG_Kelch_Keap1_1
0.0833
p.R372K
TCGA-EE-A2A1
SKCM
TCGA
DRDSGE
DEG_Kelch_Keap1_1
0.6126
p.R372K
DO38045
SKCM
ICGC
DRDSGE
DEG_Kelch_Keap1_1
0.6126
p.D371H
TCGA-XF-AAN4
BLCA
TCGA
DRDSGE
DEG_Kelch_Keap1_1
0.7688
p.D371H
DO51943
BLCA
ICGC
DRDSGE
DEG_Kelch_Keap1_1
0.7688
p.E361Q
DO48444
BLCA
ICGC
DRDSGE
DEG_Kelch_Keap1_1
0.0556
p.F367S
DO45094
LIRI
ICGC
DRDSGE
DEG_Kelch_Keap1_1
0.2222
p.R370Q
SIDM01096
Colorectal Carcinoma
GDSC
DRDSGE
DEG_Kelch_Keap1_1
0.3056
p.R370Q
SIDM01175
Other Sarcomas
GDSC
DRDSGE
DEG_Kelch_Keap1_1
0.3056
p.R370Q
ACH-000400
Colon/Colorectal Cancer
CCLE
DRDSGE
DEG_Kelch_Keap1_1
0.3056
p.R370Q
ACH-002309
Sarcoma
CCLE
DRDSGE
DEG_Kelch_Keap1_1
0.3056
p.R370Q
SW684
soft_tissue
COSMIC
DRDSGE
DEG_Kelch_Keap1_1
0.3056
p.E376Q
SIDM00473
Oral Cavity Carcinoma
GDSC
DRDSGE
DEG_Kelch_Keap1_1
0.6744
p.E376Q
ACH-000619
Head and Neck Cancer
CCLE
DRDSGE
DEG_Kelch_Keap1_1
0.6744
p.E376Q
PE/CA-PJ15
upper_aerodigestive_tract
COSMIC
DRDSGE
DEG_Kelch_Keap1_1
0.6744
p.S383T
SIDM00727
Non-Small Cell Lung Carcinoma
GDSC
DRDSGE
DEG_Kelch_Keap1_1
0.1389
p.S383T
ACH-000951
Lung Cancer
CCLE
DRDSGE
DEG_Kelch_Keap1_1
0.1389
p.S383T
NCI-H2342
lung
COSMIC
DRDSGE
DEG_Kelch_Keap1_1
0.1389
Drug responses associated with PCDHB4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DRDSGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P21127
Cyclin-dependent kinase 11B
DEG_Kelch_Keap1_1
378:383
DRDSGE
KEAP1
0.8997
More...
Q9UQ88
Cyclin-dependent kinase 11A
DEG_Kelch_Keap1_1
366:371
DRDSGE
KEAP1
0.9721
More...
Q9Y5E5
Protocadherin beta-4
DEG_Kelch_Keap1_1
371:376
DRDSGE
KEAP1
0.5628
More...
Q9Y5E8
Protocadherin beta-15
DEG_Kelch_Keap1_1
372:377
DRDSGE
KEAP1
0.6657
More...