DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGIGS
Uniprot ID:
Q5D1E8
Source protein:
Endoribonuclease ZC3H12A
Source gene:
ZC3H12A
Class:
DEG_SCF_TRCP1_1
Location:
437:442
E3 ligase:
BTRC
DEGRON score:
0.9148
ASA_SCORE:
49
COIL:
0.8393
CONS_SCORE:
0.4137
DSS_SCORE:
0.4419
HELIX:
0.1333
FCONS_SCORE:
0.9557
RIG_SCORE:
0.7147
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G439D
TCGA-06-0130
GBM
TCGA
DSGIGS
DEG_SCF_TRCP1_1
0.7198
p.G439D
DO12052
GBM
ICGC
DSGIGS
DEG_SCF_TRCP1_1
0.7198
p.S442P
TCGA-C5-A1MJ
CESC
TCGA
DSGIGS
DEG_SCF_TRCP1_1
0.6752
p.S442P
DO49017
CESC
ICGC
DSGIGS
DEG_SCF_TRCP1_1
0.6752
p.D434V
TCGA-CD-A4MG
STAD
TCGA
DSGIGS
DEG_SCF_TRCP1_1
0.25
p.D434V
DO48009
STAD
ICGC
DSGIGS
DEG_SCF_TRCP1_1
0.25
p.S438L
TCGA-D1-A17Q
UCEC
TCGA
DSGIGS
DEG_SCF_TRCP1_1
0.7667
p.S438L
TCGA-EO-A22R
UCEC
TCGA
DSGIGS
DEG_SCF_TRCP1_1
0.7667
p.S438L
DO41903
UCEC
ICGC
DSGIGS
DEG_SCF_TRCP1_1
0.7667
p.S438L
DO42713
UCEC
ICGC
DSGIGS
DEG_SCF_TRCP1_1
0.7667
p.L450F
TCGA-EI-6883
READ
TCGA
DSGIGS
DEG_SCF_TRCP1_1
0.1111
p.L450F
DO36443
READ
ICGC
DSGIGS
DEG_SCF_TRCP1_1
0.1111
p.E449Q
TCGA-GD-A76B
BLCA
TCGA
DSGIGS
DEG_SCF_TRCP1_1
0.1389
p.E449Q
DO51886
BLCA
ICGC
DSGIGS
DEG_SCF_TRCP1_1
0.1389
p.S448L
TCGA-IB-7651
PAAD
TCGA
DSGIGS
DEG_SCF_TRCP1_1
0.1667
p.S448L
DO46657
PAAD
ICGC
DSGIGS
DEG_SCF_TRCP1_1
0.1667
p.M447I
DO229006
LICA
ICGC
DSGIGS
DEG_SCF_TRCP1_1
0.1944
p.G439S
SIDM00477
Esophageal Carcinoma
GDSC
DSGIGS
DEG_SCF_TRCP1_1
0.6993
p.G439S
ACH-000383
Esophageal Cancer
CCLE
DSGIGS
DEG_SCF_TRCP1_1
0.6993
p.G439S
OE33
oesophagus
COSMIC
DSGIGS
DEG_SCF_TRCP1_1
0.6993
p.L436M
SIDM01619
Endometrial Carcinoma
GDSC
DSGIGS
DEG_SCF_TRCP1_1
0.3056
p.L436M
ACH-000984
Endometrial/Uterine Cancer
CCLE
DSGIGS
DEG_SCF_TRCP1_1
0.3056
p.M447R
ACH-001001
Bone Cancer
CCLE
DSGIGS
DEG_SCF_TRCP1_1
0.1944
Drug responses associated with ZC3H12A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGIGS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5D1E8
Endoribonuclease ZC3H12A
DEG_SCF_TRCP1_1
437:442
DSGIGS
BTRC
0.9148
More...
Q7Z7G8
Intermembrane lipid transfer protein VPS13B
DEG_SCF_TRCP1_1
1793:1798
DSGIGS
BTRC
0.9953
More...
Q8NG31
Kinetochore scaffold 1
DEG_SCF_TRCP1_1
1719:1724
DSGIGS
BTRC
0.9854
More...
Q5VUJ6
Leucine-rich repeat and calponin homology domain-containing protein 2
DEG_SCF_TRCP1_1
346:351
DSGIGS
BTRC
0.9491
More...