DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGIGT
Uniprot ID:
O14513
Source protein:
Nck-associated protein 5
Source gene:
NCKAP5
Class:
DEG_SCF_TRCP1_1
Location:
1719:1724
E3 ligase:
BTRC
DEGRON score:
0.9843
ASA_SCORE:
75.7667
COIL:
0.87
CONS_SCORE:
1
DSS_SCORE:
0.5023
HELIX:
0.0302
FCONS_SCORE:
1.1
RIG_SCORE:
0.701
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M1715L
TCGA-3H-AB3S
MESO
TCGA
DSGIGT
DEG_SCF_TRCP1_1
0.2222
p.T1724P
TCGA-D7-6528
STAD
TCGA
DSGIGT
DEG_SCF_TRCP1_1
0.7031
p.T1724P
DO38547
STAD
ICGC
DSGIGT
DEG_SCF_TRCP1_1
0.7031
p.E1710K
TCGA-FS-A1ZA
SKCM
TCGA
DSGIGT
DEG_SCF_TRCP1_1
0.0833
p.E1710K
DO37551
SKCM
ICGC
DSGIGT
DEG_SCF_TRCP1_1
0.0833
p.P1728L
TCGA-MP-A4TC
LUAD
TCGA
DSGIGT
DEG_SCF_TRCP1_1
0.2222
p.P1728L
DO45342
LUAD
ICGC
DSGIGT
DEG_SCF_TRCP1_1
0.2222
p.P1726S
DO229456
SKCA
ICGC
DSGIGT
DEG_SCF_TRCP1_1
0.2778
p.G1721R
SIDM00789
Colorectal Carcinoma
GDSC
DSGIGT
DEG_SCF_TRCP1_1
0.7568
p.G1721R
ACH-000997
Colon/Colorectal Cancer
CCLE
DSGIGT
DEG_SCF_TRCP1_1
0.7568
p.G1721R
HCT-15
large_intestine
COSMIC
DSGIGT
DEG_SCF_TRCP1_1
0.7568
Drug responses associated with NCKAP5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGIGT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9HCH0
Nck-associated protein 5-like
DEG_SCF_TRCP1_1
1123:1128
DSGIGT
BTRC
0.9892
More...
Q9NR48
Histone-lysine N-methyltransferase ASH1L
DEG_SCF_TRCP1_1
1200:1205
DSGIGT
BTRC
0.9795
More...
Q9Y6X0
SET-binding protein
DEG_SCF_TRCP1_1
868:873
DSGIGT
BTRC
0.9488
More...
O14513
Nck-associated protein 5
DEG_SCF_TRCP1_1
1719:1724
DSGIGT
BTRC
0.9843
More...