DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
DSGSHS
Uniprot ID:
P48378
Source protein:
DNA-binding protein RFX2
Source gene:
RFX2
Class:
DEG_SCF_TRCP1_1
Location:
312:317
E3 ligase:
BTRC
DEGRON score:
0.7867
ASA_SCORE:
62.2833
COIL:
0.7847
CONS_SCORE:
0.3285
DSS_SCORE:
0.799
HELIX:
0.1158
FCONS_SCORE:
1.0238
RIG_SCORE:
0.4803
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T307M
TCGA-L5-A4OI
ESCA
TCGA
DSGSHS
DEG_SCF_TRCP1_1
0.1944
p.G311R
DO229343
BTCA
ICGC
DSGSHS
DEG_SCF_TRCP1_1
0.3056
p.G311R
SIDM01879
Non-Cancerous
GDSC
DSGSHS
DEG_SCF_TRCP1_1
0.3056
p.P303T
DO232761
PBCA
ICGC
DSGSHS
DEG_SCF_TRCP1_1
0.0833
p.G318S
SIDM00654
Small Cell Lung Carcinoma
GDSC
DSGSHS
DEG_SCF_TRCP1_1
0.3056
p.L319V
SIDM00317
Kidney Carcinoma
GDSC
DSGSHS
DEG_SCF_TRCP1_1
0.2778
p.L319V
SIDM00090
Ovarian Carcinoma
GDSC
DSGSHS
DEG_SCF_TRCP1_1
0.2778
p.L319V
SIDM00181
Bladder Carcinoma
GDSC
DSGSHS
DEG_SCF_TRCP1_1
0.2778
p.L319V
SIDM01646
Non-Cancerous
GDSC
DSGSHS
DEG_SCF_TRCP1_1
0.2778
p.R302Q
SIDM01263
T-Lymphoblastic Leukemia
GDSC
DSGSHS
DEG_SCF_TRCP1_1
0.0556
p.R302Q
ACH-000995
Leukemia
CCLE
DSGSHS
DEG_SCF_TRCP1_1
0.0556
p.P320L
Mewo
skin
COSMIC
DSGSHS
DEG_SCF_TRCP1_1
0.25
Drug responses associated with RFX2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGSHS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P10071
Transcriptional activator GLI3
DEG_SCF_TRCP1_1
655:660
DSGSHS
BTRC
0.9789
More...
P48378
DNA-binding protein RFX2
DEG_SCF_TRCP1_1
312:317
DSGSHS
BTRC
0.7867
More...
Q96N21
AP-4 complex accessory subunit Tepsin
DEG_SCF_TRCP1_1
211:216
DSGSHS
BTRC
0.9272
More...
Q9GZV5
WW domain-containing transcription regulator protein 1
DEG_SCF_TRCP1_1
57:62
DSGSHS
BTRC
0.9953
More...