DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GKENP
Uniprot ID:
Q6Q759
Source protein:
Sperm-associated antigen 17
Source gene:
SPAG17
Class:
DEG_APCC_KENBOX_2
Location:
2195:2199
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7302
ASA_SCORE:
79.12
COIL:
0.8316
CONS_SCORE:
0.2807
DSS_SCORE:
0.6132
HELIX:
0.0504
FCONS_SCORE:
0.9399
RIG_SCORE:
0.6859
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P2189S
TCGA-CM-5861
COAD
TCGA
GKENP
DEG_APCC_KENBOX_2
0.1667
p.P2189S
DO7918
COAD
ICGC
GKENP
DEG_APCC_KENBOX_2
0.1667
p.R2188Q
TCGA-DA-A1HV
SKCM
TCGA
GKENP
DEG_APCC_KENBOX_2
0.1389
p.R2188Q
DO37659
SKCM
ICGC
GKENP
DEG_APCC_KENBOX_2
0.1389
p.I2207M
TCGA-EY-A1GD
UCEC
TCGA
GKENP
DEG_APCC_KENBOX_2
0.1111
p.I2207M
DO42129
UCEC
ICGC
GKENP
DEG_APCC_KENBOX_2
0.1111
p.K2187I
DO228551
GACA
ICGC
GKENP
DEG_APCC_KENBOX_2
0.2222
p.P2199T
DO228976
LICA
ICGC
GKENP
DEG_APCC_KENBOX_2
0.5919
p.P2199Q
DO32900
PACA
ICGC
GKENP
DEG_APCC_KENBOX_2
0.5924
p.V2201L
SIDM01056
Breast Carcinoma
GDSC
GKENP
DEG_APCC_KENBOX_2
0.2778
p.V2201L
ACH-000330
Breast Cancer
CCLE
GKENP
DEG_APCC_KENBOX_2
0.2778
p.V2201L
EFM-19
breast
COSMIC
GKENP
DEG_APCC_KENBOX_2
0.2778
p.S2205Y
SIDM00008
Ovarian Carcinoma
GDSC
GKENP
DEG_APCC_KENBOX_2
0.1667
p.S2205Y
ACH-000796
Ovarian Cancer
CCLE
GKENP
DEG_APCC_KENBOX_2
0.1667
Drug responses associated with SPAG17 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GKENP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P28039
Acyloxyacyl hydrolase
DEG_APCC_KENBOX_2
556:560
GKENP
APC,CDC20,FZR1
0.6187
More...
Q5K651
Sterile alpha motif domain-containing protein 9
DEG_APCC_KENBOX_2
116:120
GKENP
APC,CDC20,FZR1
0.7712
More...
Q5VTB9
E3 ubiquitin-protein ligase RNF220
DEG_APCC_KENBOX_2
384:388
GKENP
APC,CDC20,FZR1
0.7646
More...
Q6Q759
Sperm-associated antigen 17
DEG_APCC_KENBOX_2
2195:2199
GKENP
APC,CDC20,FZR1
0.7302
More...