DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPSST
Uniprot ID:
O60333
Source protein:
Kinesin-like protein KIF1B
Source gene:
KIF1B
Class:
DEG_SCF_FBW7_1
Location:
1629:1634
E3 ligase:
FBXW7
DEGRON score:
0.9994
ASA_SCORE:
79.4
COIL:
0.9205
CONS_SCORE:
0.3013
DSS_SCORE:
0.5203
HELIX:
0.037
FCONS_SCORE:
1.0446
RIG_SCORE:
0.6233
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E1639K
TCGA-DK-A6AW
BLCA
TCGA
LTPSST
DEG_SCF_FBW7_1
0.1944
p.P1625S
TCGA-EB-A3XF
SKCM
TCGA
LTPSST
DEG_SCF_FBW7_1
0.2222
p.S1641C
DO26536
LUSC
ICGC
LTPSST
DEG_SCF_FBW7_1
0.5833
p.P1631T
DO222678
MELA
ICGC
LTPSST
DEG_SCF_FBW7_1
0.7031
p.P1631T
DO37770
SKCM
ICGC
LTPSST
DEG_SCF_FBW7_1
0.7031
p.P1619L
DO222837
MELA
ICGC
LTPSST
DEG_SCF_FBW7_1
0.0556
p.P1636L
DO37881
SKCM
ICGC
LTPSST
DEG_SCF_FBW7_1
0.2778
p.E1628K
SIDM00845
Burkitt's Lymphoma
GDSC
LTPSST
DEG_SCF_FBW7_1
0.3056
p.E1639G
SIDM00282
Colorectal Carcinoma
GDSC
LTPSST
DEG_SCF_FBW7_1
0.1944
p.E1639G
CW-2
large_intestine
COSMIC
LTPSST
DEG_SCF_FBW7_1
0.1944
Drug responses associated with KIF1B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60333
Kinesin-like protein KIF1B
DEG_SCF_FBW7_1
1629:1634
LTPSST
FBXW7
0.9994
More...
P98168
Zinc finger X-linked protein ZXDA
DEG_SCF_FBW7_1
733:738
LTPSST
FBXW7
0.9895
More...
Q12756
Kinesin-like protein KIF1A
DEG_SCF_FBW7_1
1502:1507
LTPSST
FBXW7
0.9975
More...
P98169
Zinc finger X-linked protein ZXDB
DEG_SCF_FBW7_1
737:742
LTPSST
FBXW7
0.9494
More...