DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPSST
Uniprot ID:
Q12756
Source protein:
Kinesin-like protein KIF1A
Source gene:
KIF1A
Class:
DEG_SCF_FBW7_1
Location:
1502:1507
E3 ligase:
FBXW7
DEGRON score:
0.9975
ASA_SCORE:
73.2667
COIL:
0.8933
CONS_SCORE:
0.3383
DSS_SCORE:
0.4233
HELIX:
0.037
FCONS_SCORE:
1.0973
RIG_SCORE:
0.6938
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A1505T
TCGA-2W-A8YY
CESC
TCGA
LTPSST
DEG_SCF_FBW7_1
0.7139
p.H1494Q
TCGA-BG-A0MQ
UCEC
TCGA
LTPSST
DEG_SCF_FBW7_1
0.1111
p.T1492I
TCGA-EO-A22U
UCEC
TCGA
LTPSST
DEG_SCF_FBW7_1
0.0556
p.R1515W
DO9594
COAD
ICGC
LTPSST
DEG_SCF_FBW7_1
0.1111
p.R1515W
DO49466
PACA
ICGC
LTPSST
DEG_SCF_FBW7_1
0.1111
p.R1515W
DO41319
UCEC
ICGC
LTPSST
DEG_SCF_FBW7_1
0.1111
p.P1509T
DO228971
LICA
ICGC
LTPSST
DEG_SCF_FBW7_1
0.2778
p.G1517S
DO37251
READ
ICGC
LTPSST
DEG_SCF_FBW7_1
0.0556
p.S1510F
DO37515
SKCM
ICGC
LTPSST
DEG_SCF_FBW7_1
0.25
p.S1495F
DO37515
SKCM
ICGC
LTPSST
DEG_SCF_FBW7_1
0.5833
p.S1495Y
DO219452
SKCM
ICGC
LTPSST
DEG_SCF_FBW7_1
0.5833
p.S1493L
DO41488
UCEC
ICGC
LTPSST
DEG_SCF_FBW7_1
0.0833
p.G1498R
DO41361
UCEC
ICGC
LTPSST
DEG_SCF_FBW7_1
0.2222
p.S1493T
ACH-002222
Leukemia
CCLE
LTPSST
DEG_SCF_FBW7_1
0.0833
p.S1493T
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
LTPSST
DEG_SCF_FBW7_1
0.0833
Drug responses associated with KIF1A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60333
Kinesin-like protein KIF1B
DEG_SCF_FBW7_1
1629:1634
LTPSST
FBXW7
0.9994
More...
P98168
Zinc finger X-linked protein ZXDA
DEG_SCF_FBW7_1
733:738
LTPSST
FBXW7
0.9895
More...
Q12756
Kinesin-like protein KIF1A
DEG_SCF_FBW7_1
1502:1507
LTPSST
FBXW7
0.9975
More...
P98169
Zinc finger X-linked protein ZXDB
DEG_SCF_FBW7_1
737:742
LTPSST
FBXW7
0.9494
More...