DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PCSST
Uniprot ID:
Q4AC94
Source protein:
C2 domain-containing protein 3
Source gene:
C2CD3
Class:
DEG_SPOP_SBC_1
Location:
1613:1617
E3 ligase:
SPOP
DEGRON score:
0.9853
ASA_SCORE:
74.9
COIL:
0.9042
CONS_SCORE:
0.2718
DSS_SCORE:
0.5172
HELIX:
0.0434
FCONS_SCORE:
0.9358
RIG_SCORE:
0.7027
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T1610N
TCGA-20-1685
OV
TCGA
PCSST
DEG_SPOP_SBC_1
0.25
p.T1610N
DO29688
OV
ICGC
PCSST
DEG_SPOP_SBC_1
0.25
p.E1620K
TCGA-85-A4CL
LUSC
TCGA
PCSST
DEG_SPOP_SBC_1
0.25
p.E1620K
DO45454
LUSC
ICGC
PCSST
DEG_SPOP_SBC_1
0.25
p.S1606Y
TCGA-AP-A1DV
UCEC
TCGA
PCSST
DEG_SPOP_SBC_1
0.5833
p.S1606Y
DO43186
UCEC
ICGC
PCSST
DEG_SPOP_SBC_1
0.5833
p.R1622C
TCGA-BR-8361
STAD
TCGA
PCSST
DEG_SPOP_SBC_1
0.1944
p.R1622C
DO48032
STAD
ICGC
PCSST
DEG_SPOP_SBC_1
0.1944
p.T1624M
TCGA-D8-A1XF
BRCA
TCGA
PCSST
DEG_SPOP_SBC_1
0.1389
p.T1624M
DO4263
BRCA
ICGC
PCSST
DEG_SPOP_SBC_1
0.1389
p.T1624M
SIDM00178
Melanoma
GDSC
PCSST
DEG_SPOP_SBC_1
0.1389
p.T1624M
ACH-002386
Skin Cancer
CCLE
PCSST
DEG_SPOP_SBC_1
0.1389
p.E1620D
DO233170
GACA
ICGC
PCSST
DEG_SPOP_SBC_1
0.25
p.L1623M
DO229019
LICA
ICGC
PCSST
DEG_SPOP_SBC_1
0.1667
p.R1622H
SIDM00450
Acute Myeloid Leukemia
GDSC
PCSST
DEG_SPOP_SBC_1
0.1944
p.R1622H
PL-21
haematopoietic_and_lymphoid_tissue
COSMIC
PCSST
DEG_SPOP_SBC_1
0.1944
Drug responses associated with C2CD3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PCSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P10242
Transcriptional activator Myb
DEG_SPOP_SBC_1
603:607
PCSST
SPOP
0.9643
More...
P59044
NACHT, LRR and PYD domains-containing protein 6
DEG_SPOP_SBC_1
7:11
PCSST
SPOP
0.9874
More...
Q4AC94
C2 domain-containing protein 3
DEG_SPOP_SBC_1
1613:1617
PCSST
SPOP
0.9853
More...
Q96T88
E3 ubiquitin-protein ligase UHRF1
DEG_SPOP_SBC_1
169:173
PCSST
SPOP
0.9935
More...
Q99592
Zinc finger and BTB domain-containing protein 18
DEG_SPOP_SBC_1
215:219
PCSST
SPOP
0.7069
More...
Q9BZR9
E3 ubiquitin-protein ligase TRIM8
DEG_SPOP_SBC_1
418:422
PCSST
SPOP
0.9893
More...