DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PCSST
Uniprot ID:
Q9BZR9
Source protein:
E3 ubiquitin-protein ligase TRIM8
Source gene:
TRIM8
Class:
DEG_SPOP_SBC_1
Location:
418:422
E3 ligase:
SPOP
DEGRON score:
0.9893
ASA_SCORE:
66.72
COIL:
0.8276
CONS_SCORE:
0.4997
DSS_SCORE:
0.5897
HELIX:
0.1238
FCONS_SCORE:
1.0403
RIG_SCORE:
0.6512
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S421C
TCGA-55-7570
LUAD
TCGA
PCSST
DEG_SPOP_SBC_1
0.7541
p.S421C
DO25280
LUAD
ICGC
PCSST
DEG_SPOP_SBC_1
0.7541
p.S412C
TCGA-DK-A1A3
BLCA
TCGA
PCSST
DEG_SPOP_SBC_1
0.1667
p.S412C
DO558
BLCA
ICGC
PCSST
DEG_SPOP_SBC_1
0.1667
p.P429L
TCGA-EY-A549
UCEC
TCGA
PCSST
DEG_SPOP_SBC_1
0.1389
p.P429L
DO48174
UCEC
ICGC
PCSST
DEG_SPOP_SBC_1
0.1389
p.A427V
TCGA-YD-A89C
SKCM
TCGA
PCSST
DEG_SPOP_SBC_1
0.1944
p.A427V
DO219501
SKCM
ICGC
PCSST
DEG_SPOP_SBC_1
0.1944
p.T422M
DO227802
COCA
ICGC
PCSST
DEG_SPOP_SBC_1
0.7423
p.G413W
DO228948
LICA
ICGC
PCSST
DEG_SPOP_SBC_1
0.1944
p.G413V
DO228948
LICA
ICGC
PCSST
DEG_SPOP_SBC_1
0.1944
p.L416P
DO218878
SKCA
ICGC
PCSST
DEG_SPOP_SBC_1
0.2778
p.L416P
DO218842
SKCA
ICGC
PCSST
DEG_SPOP_SBC_1
0.2778
p.A432T
SIDM00283
B-Cell Non-Hodgkin's Lymphoma
GDSC
PCSST
DEG_SPOP_SBC_1
0.0556
p.A432T
ACH-002221
Lymphoma
CCLE
PCSST
DEG_SPOP_SBC_1
0.0556
p.A432T
CTB-1
haematopoietic_and_lymphoid_tissue
COSMIC
PCSST
DEG_SPOP_SBC_1
0.0556
Drug responses associated with TRIM8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PCSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P10242
Transcriptional activator Myb
DEG_SPOP_SBC_1
603:607
PCSST
SPOP
0.9643
More...
P59044
NACHT, LRR and PYD domains-containing protein 6
DEG_SPOP_SBC_1
7:11
PCSST
SPOP
0.9874
More...
Q4AC94
C2 domain-containing protein 3
DEG_SPOP_SBC_1
1613:1617
PCSST
SPOP
0.9853
More...
Q96T88
E3 ubiquitin-protein ligase UHRF1
DEG_SPOP_SBC_1
169:173
PCSST
SPOP
0.9935
More...
Q99592
Zinc finger and BTB domain-containing protein 18
DEG_SPOP_SBC_1
215:219
PCSST
SPOP
0.7069
More...
Q9BZR9
E3 ubiquitin-protein ligase TRIM8
DEG_SPOP_SBC_1
418:422
PCSST
SPOP
0.9893
More...