DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PHSTT
Uniprot ID:
Q8NFZ4
Source protein:
Neuroligin-2
Source gene:
NLGN2
Class:
DEG_SPOP_SBC_1
Location:
829:833
E3 ligase:
SPOP
DEGRON score:
0.9949
ASA_SCORE:
80.04
COIL:
0.7844
CONS_SCORE:
0.2725
DSS_SCORE:
0.9366
HELIX:
0.0494
FCONS_SCORE:
1.182
RIG_SCORE:
0.6518
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R834L
DO229009
LICA
ICGC
PHSTT
DEG_SPOP_SBC_1
0.3056
p.H828P
DO229208
THCA
ICGC
PHSTT
DEG_SPOP_SBC_1
0.3056
p.H828P
DO229218
THCA
ICGC
PHSTT
DEG_SPOP_SBC_1
0.3056
p.P829A
SIDM00084
Glioblastoma
GDSC
PHSTT
DEG_SPOP_SBC_1
0.6392
p.P829A
ACH-000376
Brain Cancer
CCLE
PHSTT
DEG_SPOP_SBC_1
0.6392
p.H828Y
ACH-001642
Lymphoma
CCLE
PHSTT
DEG_SPOP_SBC_1
0.3056
Drug responses associated with NLGN2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PHSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P16144
Integrin beta-4
DEG_SPOP_SBC_1
1095:1099
PHSTT
SPOP
0.6709
More...
Q68CP9
AT-rich interactive domain-containing protein 2
DEG_SPOP_SBC_1
1471:1475
PHSTT
SPOP
0.961
More...
Q8NFZ4
Neuroligin-2
DEG_SPOP_SBC_1
829:833
PHSTT
SPOP
0.9949
More...
Q5SQH8
Uncharacterized protein C6orf136
DEG_SPOP_SBC_1
39:43
PHSTT
SPOP
0.9871
More...