DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
PYSST
Uniprot ID:
A1L4H1
Source protein:
Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D
Source gene:
SSC5D
Class:
DEG_SPOP_SBC_1
Location:
1131:1135
E3 ligase:
SPOP
DEGRON score:
0.9205
ASA_SCORE:
78.6
COIL:
0.7456
CONS_SCORE:
0.3649
DSS_SCORE:
0.7399
HELIX:
0.0526
FCONS_SCORE:
-0.0016
RIG_SCORE:
0.6347
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Y1139H
DO23610
LUAD
ICGC
PYSST
DEG_SPOP_SBC_1
0.2222
p.S1140F
SIDM01002
Breast Carcinoma
GDSC
PYSST
DEG_SPOP_SBC_1
0.1944
p.S1140F
ACH-000117
Breast Cancer
CCLE
PYSST
DEG_SPOP_SBC_1
0.1944
p.S1140F
EFM-192A
breast
COSMIC
PYSST
DEG_SPOP_SBC_1
0.1944
p.S1140Y
ACH-001846
Bile Duct Cancer
CCLE
PYSST
DEG_SPOP_SBC_1
0.1944
Drug responses associated with SSC5D mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PYSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A1L4H1
Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D
DEG_SPOP_SBC_1
1131:1135
PYSST
SPOP
0.9205
More...
Q5VV67
Peroxisome proliferator-activated receptor gamma coactivator-related protein 1
DEG_SPOP_SBC_1
972:976
PYSST
SPOP
0.9181
More...
Q9BSJ6
Protein PIMREG
DEG_SPOP_SBC_1
186:190
PYSST
SPOP
0.9992
More...
Q5VWK0
Neuroblastoma breakpoint family member 6
DEG_SPOP_SBC_1
454:458
PYSST
SPOP
0.9861
More...
Q96M43
Neuroblastoma breakpoint family member 4
DEG_SPOP_SBC_1
454:458
PYSST
SPOP
0.9948
More...