DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
QKENP
Uniprot ID:
Q8TAT5
Source protein:
Endonuclease 8-like 3
Source gene:
NEIL3
Class:
DEG_APCC_KENBOX_2
Location:
280:284
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.624
ASA_SCORE:
81.6
COIL:
0.8544
CONS_SCORE:
0.4694
DSS_SCORE:
0.0333
HELIX:
0.0646
FCONS_SCORE:
0.8793
RIG_SCORE:
0.7576
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V287G
TCGA-B5-A3FA
UCEC
TCGA
QKENP
DEG_APCC_KENBOX_2
0.25
p.V287G
DO52402
UCEC
ICGC
QKENP
DEG_APCC_KENBOX_2
0.25
p.P284S
TCGA-D3-A8GL
SKCM
TCGA
QKENP
DEG_APCC_KENBOX_2
0.5641
p.P284S
DO50287
SKCM
ICGC
QKENP
DEG_APCC_KENBOX_2
0.5641
p.T273S
TCGA-HU-8602
STAD
TCGA
QKENP
DEG_APCC_KENBOX_2
0.1389
p.T273S
DO47829
STAD
ICGC
QKENP
DEG_APCC_KENBOX_2
0.1389
p.H286R
DO229505
LAML
ICGC
QKENP
DEG_APCC_KENBOX_2
0.2778
p.C290Y
DO229050
LICA
ICGC
QKENP
DEG_APCC_KENBOX_2
0.1667
Drug responses associated with NEIL3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of QKENP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60284
Suppression of tumorigenicity 18 protein
DEG_APCC_KENBOX_2
847:851
QKENP
APC,CDC20,FZR1
0.8117
More...
O60721
Sodium/potassium/calcium exchanger 1
DEG_APCC_KENBOX_2
737:741
QKENP
APC,CDC20,FZR1
0.7728
More...
Q8TAT5
Endonuclease 8-like 3
DEG_APCC_KENBOX_2
280:284
QKENP
APC,CDC20,FZR1
0.624
More...
Q8WVJ2
NudC domain-containing protein 2
DEG_APCC_KENBOX_2
128:132
QKENP
APC,CDC20,FZR1
0.9986
More...