DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
QKENP
Uniprot ID:
Q8WVJ2
Source protein:
NudC domain-containing protein 2
Source gene:
NUDCD2
Class:
DEG_APCC_KENBOX_2
Location:
128:132
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9986
ASA_SCORE:
107.04
COIL:
0.8054
CONS_SCORE:
0.6701
DSS_SCORE:
0.4308
HELIX:
0.1652
FCONS_SCORE:
1.0385
RIG_SCORE:
0.7292
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E125Q
TCGA-78-7149
LUAD
TCGA
QKENP
DEG_APCC_KENBOX_2
0.25
p.R120K
TCGA-DF-A2KU
UCEC
TCGA
QKENP
DEG_APCC_KENBOX_2
0.1111
p.F127I
TCGA-DX-A8BP
SARC
TCGA
QKENP
DEG_APCC_KENBOX_2
0.3056
p.N119Y
DO1579
BRCA
ICGC
QKENP
DEG_APCC_KENBOX_2
0.0833
p.G124E
DO50329
ESAD
ICGC
QKENP
DEG_APCC_KENBOX_2
0.2222
p.E131Q
DO47723
STAD
ICGC
QKENP
DEG_APCC_KENBOX_2
0.6744
p.D126N
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
QKENP
DEG_APCC_KENBOX_2
0.2778
p.S128L
CP66-MEL
skin
COSMIC
QKENP
DEG_APCC_KENBOX_2
0.7667
Drug responses associated with NUDCD2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of QKENP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60284
Suppression of tumorigenicity 18 protein
DEG_APCC_KENBOX_2
847:851
QKENP
APC,CDC20,FZR1
0.8117
More...
O60721
Sodium/potassium/calcium exchanger 1
DEG_APCC_KENBOX_2
737:741
QKENP
APC,CDC20,FZR1
0.7728
More...
Q8TAT5
Endonuclease 8-like 3
DEG_APCC_KENBOX_2
280:284
QKENP
APC,CDC20,FZR1
0.624
More...
Q8WVJ2
NudC domain-containing protein 2
DEG_APCC_KENBOX_2
128:132
QKENP
APC,CDC20,FZR1
0.9986
More...