DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RKENS
Uniprot ID:
Q9NYV4
Source protein:
Cyclin-dependent kinase 12
Source gene:
CDK12
Class:
DEG_APCC_KENBOX_2
Location:
429:433
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9897
ASA_SCORE:
113.3
COIL:
0.8914
CONS_SCORE:
0.3056
DSS_SCORE:
0.5757
HELIX:
0.0904
FCONS_SCORE:
0.9936
RIG_SCORE:
0.6504
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V425A
TCGA-38-4628
LUAD
TCGA
RKENS
DEG_APCC_KENBOX_2
0.2222
p.V425A
DO26354
LUAD
ICGC
RKENS
DEG_APCC_KENBOX_2
0.2222
p.K438R
TCGA-50-5930
LUAD
TCGA
RKENS
DEG_APCC_KENBOX_2
0.3056
p.K438R
DO25189
LUAD
ICGC
RKENS
DEG_APCC_KENBOX_2
0.3056
p.P428R
TCGA-85-8580
LUSC
TCGA
RKENS
DEG_APCC_KENBOX_2
0.3056
p.P428R
DO45549
LUSC
ICGC
RKENS
DEG_APCC_KENBOX_2
0.3056
p.F426V
TCGA-FI-A2D5
UCEC
TCGA
RKENS
DEG_APCC_KENBOX_2
0.25
p.F426V
DO41331
UCEC
ICGC
RKENS
DEG_APCC_KENBOX_2
0.25
p.K421N
TCGA-G4-6628
COAD
TCGA
RKENS
DEG_APCC_KENBOX_2
0.5556
p.K421N
DO10132
COAD
ICGC
RKENS
DEG_APCC_KENBOX_2
0.5556
p.S423L
DO222395
MELA
ICGC
RKENS
DEG_APCC_KENBOX_2
0.6111
p.N432H
ACH-001329
Brain Cancer
CCLE
RKENS
DEG_APCC_KENBOX_2
0.7423
Drug responses associated with CDK12 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RKENS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13427
Peptidyl-prolyl cis-trans isomerase G
DEG_APCC_KENBOX_2
654:658
RKENS
APC,CDC20,FZR1
0.9596
More...
Q8WXI7
Mucin-16
DEG_APCC_KENBOX_2
4603:4607
RKENS
APC,CDC20,FZR1
0.8741
More...
Q9NYV4
Cyclin-dependent kinase 12
DEG_APCC_KENBOX_2
429:433
RKENS
APC,CDC20,FZR1
0.9897
More...
Q9Y6M1
Insulin-like growth factor 2 mRNA-binding protein 2
DEG_APCC_KENBOX_2
231:235
RKENS
APC,CDC20,FZR1
0.8712
More...