DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
RKENS
Uniprot ID:
Q9Y6M1
Source protein:
Insulin-like growth factor 2 mRNA-binding protein 2
Source gene:
IGF2BP2
Class:
DEG_APCC_KENBOX_2
Location:
231:235
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8712
ASA_SCORE:
122.02
COIL:
0.882
CONS_SCORE:
0.4847
DSS_SCORE:
0.5817
HELIX:
0.044
FCONS_SCORE:
0.906
RIG_SCORE:
0.6808
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P241H
TCGA-AP-A051
UCEC
TCGA
RKENS
DEG_APCC_KENBOX_2
0.1667
p.P241H
DO42673
UCEC
ICGC
RKENS
DEG_APCC_KENBOX_2
0.1667
p.R226W
TCGA-DX-AB32
SARC
TCGA
RKENS
DEG_APCC_KENBOX_2
0.1944
p.R226W
TCGA-EO-A22R
UCEC
TCGA
RKENS
DEG_APCC_KENBOX_2
0.1944
p.R226W
DO220102
SARC
ICGC
RKENS
DEG_APCC_KENBOX_2
0.1944
p.R226W
DO42713
UCEC
ICGC
RKENS
DEG_APCC_KENBOX_2
0.1944
p.R226W
SNU-407
large_intestine
COSMIC
RKENS
DEG_APCC_KENBOX_2
0.1944
p.S225F
DO234370
ESAD
ICGC
RKENS
DEG_APCC_KENBOX_2
0.1667
p.R231I
DO223007
ESCA
ICGC
RKENS
DEG_APCC_KENBOX_2
0.6991
p.R232W
SIDM00214
Colorectal Carcinoma
GDSC
RKENS
DEG_APCC_KENBOX_2
0.8634
p.R232W
SNU-407
large_intestine
COSMIC
RKENS
DEG_APCC_KENBOX_2
0.8634
Drug responses associated with IGF2BP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RKENS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13427
Peptidyl-prolyl cis-trans isomerase G
DEG_APCC_KENBOX_2
654:658
RKENS
APC,CDC20,FZR1
0.9596
More...
Q8WXI7
Mucin-16
DEG_APCC_KENBOX_2
4603:4607
RKENS
APC,CDC20,FZR1
0.8741
More...
Q9NYV4
Cyclin-dependent kinase 12
DEG_APCC_KENBOX_2
429:433
RKENS
APC,CDC20,FZR1
0.9897
More...
Q9Y6M1
Insulin-like growth factor 2 mRNA-binding protein 2
DEG_APCC_KENBOX_2
231:235
RKENS
APC,CDC20,FZR1
0.8712
More...